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Protein-nucleic acid interaction


This category describes methods for the analysis of protein-nucleic acid interactions including footprinting, interference, cross-linking, fluorescence techniques, one- and tri-hybrid strategies, in vivo methods and analysis of mutants.


Citations 101-110 of 141 total displayed.

Past content

NAR Methods Online
Heteromeric MAPPIT: a novel strategy to study modification-dependent protein–protein interactions in mammalian cells
Irma Lemmens, Sven Eyckerman, Lennart Zabeau, Dominiek Catteeuw, Els Vertenten, Kristin Verschueren, Danny Huylebroeck, Joël Vandekerckhove, and Jan Tavernier
Nucleic Acids Res. 2003; 31: e75. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Immunofluorescence assay and flow-cytometry selection of bead-bound aptamers
Xianbin Yang, Xin Li, Tarl W. Prow, Lisa M. Reece, Suzanne E. Bassett, Bruce A. Luxon, Norbert K. Herzog, Judy Aronson, Robert E. Shope, James F. Leary, and David G. Gorenstein
Nucleic Acids Res. 2003; 31: e54. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Design of artificial transcription factors to selectively regulate the pro-apoptotic bax gene
D. Falke, M. Fisher, D. Ye, and R. L. Juliano
Nucleic Acids Res. 2003; 31: e10. [Abstract] [Full text] [Print PDF]  

Articles
Investigating the target recognition of DNA cytosine-5 methyltransferase HhaI by library selection using in vitro compartmentalisation
Yin-Fai Lee, Dan S. Tawfik, and Andrew D. Griffiths
Nucleic Acids Res. 2002; 30: 4937-4944. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
EZ-Retrieve: a web-server for batch retrieval of coordinate-specified human DNA sequences and underscoring putative transcription factor-binding sites
Haibo Zhang, Y. Ramanathan, Patricia Soteropoulos, Michael L. Recce, and Peter P. Tolias
Nucleic Acids Res. 2002; 30: e121. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Automated selection of aptamers against protein targets translated in vitro: from gene to aptamer
J. Colin Cox, Andrew Hayhurst, Jay Hesselberth, Travis S. Bayer, George Georgiou, and Andrew D. Ellington
Nucleic Acids Res. 2002; 30: e108. [Abstract] [Full text] [Print PDF]  

Articles
Partial reconstitution of human RNase P in HeLa cells between its RNA subunit with an affinity tag and the intact protein components
Yong Li and Sidney Altman
Nucleic Acids Res. 2002; 30: 3706-3711. [Abstract] [Full text] [Print PDF]  

Articles
Definition and prediction of the full range of transcription factor binding sites—the hepatocyte nuclear factor 1 dimeric site
Joseph Locker, David Ghosh, Phuong-Van Luc, and Jianhua Zheng
Nucleic Acids Res. 2002; 30: 3809-3817. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Removal of impurities from transcription factor preparations that alter their DNA-binding properties
Liping Sun and Thomas Kodadek
Nucleic Acids Res. 2002; 30: e88. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Characterisation of the DNA-binding profile of barley HvCBF1 using an enzymatic method for rapid, quantitative and high-throughput analysis of the DNA-binding activity
Gang-Ping Xue
Nucleic Acids Res. 2002; 30: e77. [Abstract] [Full text] [Print PDF]  

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