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Protein-nucleic acid interaction


This category describes methods for the analysis of protein-nucleic acid interactions including footprinting, interference, cross-linking, fluorescence techniques, one- and tri-hybrid strategies, in vivo methods and analysis of mutants.


Citations 111-120 of 141 total displayed.

Past content

NAR Methods Online
DNA affinity capture and protein profiling by SELDI-TOF mass spectrometry: effect of DNA methylation
Thomas K. Bane, James F. LeBlanc, Terry D. Lee, and Arthur D. Riggs
Nucleic Acids Res. 2002; 30: e69. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Combining chromatin immunoprecipitation and DNA footprinting: a novel method to analyze protein–DNA interactions in vivo
Sung-Hae Lee Kang, Karen Vieira, and Jörg Bungert
Nucleic Acids Res. 2002; 30: e44. [Abstract] [Full text] [Print PDF]  

Articles
A dual reporter screening system identifies the amino acid at position 82 in Flp site-specific recombinase as a determinant for target specificity
Yuri Voziyanov, A. Francis Stewart, and Makkuni Jayaram
Nucleic Acids Res. 2002; 30: 1656-1663. [Abstract] [Full text] [Print PDF]  

Articles
Magnesium is required for specific DNA binding of the CREB B-ZIP domain
Jonathan R. Moll, Asha Acharya, Jozset Gal, Alain A. Mir, and Charles Vinson
Nucleic Acids Res. 2002; 30: 1240-1246. [Abstract] [Full text] [Print PDF]  

Articles
hMutS{alpha} forms an ATP-dependent complex with hMutL{alpha} and hMutLß on DNA
Guido Plotz, Jochen Raedle, Angela Brieger, Jörg Trojan, and Stefan Zeuzem
Nucleic Acids Res. 2002; 30: 711-718. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Nucleic acid fragmentation on the millisecond timescale using a conventional X-ray rotating anode source: application to protein–DNA footprinting
Arnon Henn, Jacob Halfon, Itai Kela, Itzhak Orion, and Irit Sagi
Nucleic Acids Res. 2001; 29: e122. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Robust and efficient synthetic method for forming DNA microarrays
Patricia L. Dolan, Yang Wu, Linnea K. Ista, Robert L. Metzenberg, Mary Anne Nelson, and Gabriel P. Lopez
Nucleic Acids Res. 2001; 29: e107. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
Expression and purification of recombinant human c-Fos/c-Jun that is highly active in DNA binding and transcriptional activation in vitro
Heather A. Ferguson and James A. Goodrich
Nucleic Acids Res. 2001; 29: e98. [Abstract] [Full text] [Print PDF]  

NAR Methods Online
The mapping of nucleosomes and regulatory protein binding sites at the Saccharomyces cerevisiae MFA2 gene: a high resolution approach
Yumin Teng, Shirong Yu, and Raymond Waters
Nucleic Acids Res. 2001; 29: e64. [Abstract] [Full text] [Print PDF]  

Articles
Non-independence of Mnt repressor–operator interaction determined by a new quantitative multiple fluorescence relative affinity (QuMFRA) assay
Tsz-Kwong Man and Gary D. Stormo
Nucleic Acids Res. 2001; 29: 2471-2478. [Abstract] [Full text] [Print PDF]  

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