|
Protein-nucleic acid interaction
This category describes methods for the analysis of protein-nucleic acid interactions including footprinting, interference, cross-linking, fluorescence techniques, one- and tri-hybrid strategies, in vivo methods and analysis of mutants.
Citations 31-40 of 140 total displayed.
- Computational Biology
Associating transcription factor-binding site motifs with target GO terms and target genes
- Mikael Bodén and Timothy L. Bailey
Nucleic Acids Res. 2008; 36: 4108-4117.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Computational Biology
Extracting sequence features to predict protein–DNA interactions: a comparative study
- Qing Zhou and Jun S. Liu
Nucleic Acids Res. 2008; 36: 4137-4148.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Methods Online
Chemical mapping of cytosines enzymatically flipped out of the DNA helix
- Dalia Daujotyte, Zita Liutkeviciute, Gintautas Tamulaitis, and Saulius Klimasauskas
Nucleic Acids Res. 2008; 36: e57.
[Abstract]
[Full text]
[Print PDF]
- Methods Online
Gel-based oligonucleotide microarray approach to analyze protein–ssDNA binding specificity
- Olga A. Zasedateleva, Andrey L. Mikheikin, Alexander Y. Turygin, Dmitry V. Prokopenko, Alexander V. Chudinov, Elena E. Belobritskaya, Vladimir R. Chechetkin, and Alexander S. Zasedatelev
Nucleic Acids Res. 2008; 36: e61.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Computational Biology
CSI-Tree: a regression tree approach for modeling binding properties of DNA-binding molecules based on cognate site identification (CSI) data
- Sündüz Keles, Christopher L. Warren, Clayton D. Carlson, and Aseem Z. Ansari
Nucleic Acids Res. 2008; 36: 3171-3184.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Methods Online
Detecting cis-regulatory binding sites for cooperatively binding proteins
- Liesbeth van Oeffelen, Pierre Cornelis, Wouter Van Delm, Fedor De Ridder, Bart De Moor, and Yves Moreau
Nucleic Acids Res. 2008; 36: e46.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Molecular Biology
Single-molecule manipulation reveals supercoiling-dependent modulation of lac repressor-mediated DNA looping
- Davide Normanno, Francesco Vanzi, and Francesco Saverio Pavone
Nucleic Acids Res. 2008; 36: 2505-2513.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Genomics
A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system
- Marcus B. Noyes, Xiangdong Meng, Atsuya Wakabayashi, Saurabh Sinha, Michael H. Brodsky, and Scot A. Wolfe
Nucleic Acids Res. 2008; 36: 2547-2560.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Computational Biology
Algorithm for prediction of tumour suppressor p53 affinity for binding sites in DNA
- Dmitry B. Veprintsev and Alan R. Fersht
Nucleic Acids Res. 2008; 36: 1589-1598.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
- Methods Online
Microplate-based chromatin immunoprecipitation method, Matrix ChIP: a platform to study signaling of complex genomic events
- Steve Flanagin, Joel D. Nelson, David G. Castner, Oleg Denisenko, and Karol Bomsztyk
Nucleic Acids Res. 2008; 36: e17.
[Abstract]
[Full text]
[Print PDF]
[ Supplementary Data ]
|
|
 Subspecialty Collections Home
|
|
