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Cell biology


This category presents methods using nucleic acids to answer questions in the field of cellular biology. These can be vector-based assays to analyze cellular processes such as intra- and inter-cellular transport, apoptosis, etc. Methods for structural and biochemical studies of nucleic acid-containing organelles and macromolecular, nucleoprotein particles are also presented.


Citations 1-10 of 27 total displayed.

Most recent content

Methods Online
Discriminating single-base difference miRNA expressions using microarray Probe Design Guru (ProDeG)
Inhan Lee, Subramanian S. Ajay, Haiming Chen, Atsushi Maruyama, Nulang Wang, Melvin G. McInnis, and Brian D. Athey
Nucleic Acids Res. 2008; 36: e27. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Past content

Methods Online
Surveillance of siRNA integrity by FRET imaging
Anne Järve, Julius Müller, Il-Han Kim, Karl Rohr, Caroline MacLean, Gert Fricker, Ulrich Massing, Florian Eberle, Alexander Dalpke, Roger Fischer, Michael F. Trendelenburg, and Mark Helm
Nucleic Acids Res. 2007; 35: e124. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
Live cell imaging of repetitive DNA sequences via GFP-tagged polydactyl zinc finger proteins
Beatrice I. Lindhout, Paul Fransz, Federico Tessadori, Tobias Meckel, Paul J.J. Hooykaas, and Bert J. van der Zaal
Nucleic Acids Res. 2007; 35: e107. [Abstract] [Full text] [Print PDF]  

RNA
Dynamics of filamentous viral RNPs prior to egress
Philip J. Santangelo and Gang Bao
Nucleic Acids Res. 2007; 35: 3602-3611. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Nuclear accumulation of plasmid DNA can be enhanced by non-selective gating of the nuclear pore
Roosmarijn E. Vandenbroucke, Bart Lucas, Joseph Demeester, Stefaan C. De Smedt, and Niek N. Sanders
Nucleic Acids Res. 2007; 35: e86. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes
Rory M. Watt, Jing Wang, Meikid Leong, Hsiang-fu Kung, Kathryn S.E. Cheah, Depei Liu, Antoine Danchin, and Jian-Dong Huang
Nucleic Acids Res. 2007; 35: e37. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Computational Biology
PLPD: reliable protein localization prediction from imbalanced and overlapped datasets
KiYoung Lee, Dae-Won Kim, DoKyun Na, Kwang H. Lee, and Doheon Lee
Nucleic Acids Res. 2006; 34: 4655-4666. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Computational Biology
Computational analysis of tissue-specific combinatorial gene regulation: predicting interaction between transcription factors in human tissues
Xueping Yu, Jimmy Lin, Donald J. Zack, and Jiang Qian
Nucleic Acids Res. 2006; 34: 4925-4936. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
PLPD: reliable protein localization prediction from imbalanced and overlapped datasets
KiYoung Lee, Dae-Won Kim, DoKyun Na, Kwang H. Lee, and Doheon Lee
Nucleic Acids Res. Advance Access published on September 11, 2006; doi: 10.1093/nar/gkl638. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
High-throughput trapping of secretory pathway genes in mouse embryonic stem cells
Silke De-Zolt, Frank Schnütgen, Claudia Seisenberger, Jens Hansen, Melanie Hollatz, Thomas Floss, Patricia Ruiz, Wolfgang Wurst, and Harald von Melchner
Nucleic Acids Res. 2006; 34: e25. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

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