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Computational methods
Computational Methods include useful new routines and algorithms with applications to Bioinformatics such as new sequence manipulation and analysis methods. Also included are new methods of computational analysis of biological data that facilitate data interpretation.
Citations 341-350 of 364 total displayed.
- NAR Methods Online
Analyzing partially randomized nucleic acid pools: straight dope on doping
- Rob Knight and Michael Yarus
Nucleic Acids Res. 2003; 31: e30.
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Toucan: deciphering the cis-regulatory logic of coregulated genes
- Stein Aerts, Gert Thijs, Bert Coessens, Mik Staes, Yves Moreau, and Bart De Moor
Nucleic Acids Res. 2003; 31: 1753-1764.
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ZCURVE: a new system for recognizing protein-coding genes in bacterial and archaeal genomes
- Feng-Biao Guo, Hong-Yu Ou, and Chun-Ting Zhang
Nucleic Acids Res. 2003; 31: 1780-1789.
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The structure of full-length LysR-type transcriptional regulators. Modeling of the full-length OxyR transcription factor dimer
- Jolanta Zaim and Andrzej M. Kierzek
Nucleic Acids Res. 2003; 31: 1444-1454.
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Improving the performance of DomainParser for structural domain partition using neural network
- Jun-tao Guo, Dong Xu, Dongsup Kim, and Ying Xu
Nucleic Acids Res. 2003; 31: 944-952.
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A novel algorithm for computational identification of contaminated EST libraries
- Rotem Sorek and Hershel M. Safer
Nucleic Acids Res. 2003; 31: 1067-1074.
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Finding weak similarities between proteins by sequence profile comparison
- Anna R. Panchenko
Nucleic Acids Res. 2003; 31: 683-689.
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Inferring functional constraints and divergence in protein families using 3D mapping of phylogenetic information
- Christian Blouin, Yan Boucher, and Andrew J. Roger
Nucleic Acids Res. 2003; 31: 790-797.
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- NAR Methods Online
Stochastic processes defining sensitivity and variability of internally calibrated quantitative NASBA-based viral load assays
- Jos J. A. M. Weusten, Pieter A. W. M. Wouters, Martien C. A. van Zuijlen, and Paul A. van de Wiel
Nucleic Acids Res. 2002; 30: e137.
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Exploring root symbiotic programs in the model legume Medicago truncatula using EST analysis
- Etienne-Pascal Journet, Diederik van Tuinen, Jérome Gouzy, Hervé Crespeau, Véronique Carreau, Mary-Jo Farmer, Andreas Niebel, Thomas Schiex, Olivier Jaillon, Odile Chatagnier, Laurence Godiard, Fabienne Micheli, Daniel Kahn, Vivienne Gianinazzi-Pearson, and Pascal Gamas
Nucleic Acids Res. 2002; 30: 5579-5592.
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