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Computational methods
Computational Methods include useful new routines and algorithms with applications to Bioinformatics such as new sequence manipulation and analysis methods. Also included are new methods of computational analysis of biological data that facilitate data interpretation.
Citations 351-359 of 359 total displayed.
- Articles
Fast algorithms for large-scale genome alignment and comparison
- Arthur L. Delcher, Adam Phillippy, Jane Carlton, and Steven L. Salzberg
Nucleic Acids Res. 2002; 30: 2478-2483.
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- NAR Methods Online
Conditional cell ablation by stringent tetracycline-dependent regulation of barnase in mammalian cells
- Stefanie Leuchtenberger, Angela Perz, Christiane Gatz, and Jörg W. Bartsch
Nucleic Acids Res. 2001; 29: e76.
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- NAR Methods Online
Quantitative quality control in microarray image processing and data acquisition
- Xujing Wang, Soumitra Ghosh, and Sun-Wei Guo
Nucleic Acids Res. 2001; 29: e75.
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- Articles
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
- Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul
Nucleic Acids Res. 2001; 29: 2994-3005.
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- Articles
GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
- John Besemer, Alexandre Lomsadze, and Mark Borodovsky
Nucleic Acids Res. 2001; 29: 2607-2618.
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- Articles
Discovering common stem–loop motifs in unaligned RNA sequences
- Jan Gorodkin, Shawn L. Stricklin, and Gary D. Stormo
Nucleic Acids Res. 2001; 29: 2135-2144.
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- Articles
Gene2EST: a BLAST2 server for searching expressed sequence tag (EST) databases with eukaryotic gene-sized queries
- Christine Gemünd, Chenna Ramu, Brigitte Altenberg-Greulich, and Toby J. Gibson
Nucleic Acids Res. 2001; 29: 1272-1277.
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- Articles
Comparative analysis of the gene-dense ACHE/TFR2 region on human chromosome 7q22 with the orthologous region on mouse chromosome 5
- Michael D. Wilson, Cathy Riemer, Duane W. Martindale, Pamela Schnupf, Andrew P. Boright, Tony L. Cheung, Daniel M. Hardy, Scott Schwartz, Stephen W. Scherer, Lap-Chee Tsui, Webb Miller, and Ben F. Koop
Nucleic Acids Res. 2001; 29: 1352-1365.
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- Articles
The estimation of statistical parameters for local alignment score distributions
- Stephen F. Altschul, Ralf Bundschuh, Rolf Olsen, and Terence Hwa
Nucleic Acids Res. 2001; 29: 351-361.
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