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Computational methods
Computational Methods include useful new routines and algorithms with applications to Bioinformatics such as new sequence manipulation and analysis methods. Also included are new methods of computational analysis of biological data that facilitate data interpretation.
Citations 81-90 of 359 total displayed.
- Methods Online
Efficacy assessment of SNP sets for genome-wide disease association studies
- Andreas Wollstein, Alexander Herrmann, Michael Wittig, Michael Nothnagel, Andre Franke, Peter Nürnberg, Stefan Schreiber, Michael Krawczak, and Jochen Hampe
Nucleic Acids Res. 2007; 35: e113.
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- Methods Online
SAGETTARIUS: a program to reduce the number of tags mapped to multiple transcripts and to plan SAGE sequencing stages
- Laurent Bianchetti, Yan Wu, Eric Guerin, Frédéric Plewniak, and Olivier Poch
Nucleic Acids Res. 2007; 35: e122.
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- Computational Biology
A survey of bacterial insertion sequences using IScan
- Andreas Wagner, Christopher Lewis, and Manuel Bichsel
Nucleic Acids Res. 2007; 35: 5284-5293.
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- RNA
In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership
- Éena Jakó, Péter Ittzés, Áron Szenes, Ádám Kun, Eörs Szathmáry, and Gábor Pál
Nucleic Acids Res. 2007; 35: 5593-5609.
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- Computational Biology
A systematic strategy for large-scale analysis of genotype–phenotype correlations: identification of candidate genes involved in African trypanosomiasis
- Paul Fisher, Cornelia Hedeler, Katherine Wolstencroft, Helen Hulme, Harry Noyes, Stephen Kemp, Robert Stevens, and Andrew Brass
Nucleic Acids Res. 2007; 35: 5625-5633.
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- Methods Online
Meta-prediction of protein subcellular localization with reduced voting
- Jie Liu, Shuli Kang, Chuanning Tang, Lynda B.M. Ellis, and Tongbin Li
Nucleic Acids Res. 2007; 35: e96.
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- Methods Online
Toward a universal microarray: prediction of gene expression through nearest-neighbor probe sequence identification
- Thomas E. Royce, Joel S. Rozowsky, and Mark B. Gerstein
Nucleic Acids Res. 2007; 35: e99.
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- Computational Biology
Automated recognition of retroviral sequences in genomic data—RetroTector©
- Göran O. Sperber, Tove Airola, Patric Jern, and Jonas Blomberg
Nucleic Acids Res. 2007; 35: 4964-4976.
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- Computational Biology
Dissecting the action of an evolutionary conserved non-coding region on renin promoter activity
- Ralf Mrowka, Andreas Steege, Charlotte Kaps, Hanspeter Herzel, Bernd J. Thiele, Pontus B. Persson, and Nils Blüthgen
Nucleic Acids Res. 2007; 35: 5120-5129.
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- Genomics
Detecting laterally transferred genes: use of entropic clustering methods and genome position
- Rajeev K. Azad and Jeffrey G. Lawrence
Nucleic Acids Res. 2007; 35: 4629-4639.
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