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DNA characterisation


This category includes all new methods, or highly significant improvement thereof, for the biochemical and physical characterization of DNA. This includes DNA purification from various sources (e.g. ancient DNA, DNA from widely used hosts), DNA quantification, DNA analysis (by enzymatic, gel electrophoresis, mass-spectrometry, hybridization, assay) as well as determination of DNA sequences.


Citations 21-30 of 178 total displayed.

Past content

Methods Online
Live cell imaging of repetitive DNA sequences via GFP-tagged polydactyl zinc finger proteins
Beatrice I. Lindhout, Paul Fransz, Federico Tessadori, Tobias Meckel, Paul J.J. Hooykaas, and Bert J. van der Zaal
Nucleic Acids Res. 2007; 35: e107. [Abstract] [Full text] [Print PDF]  

Methods Online
Targeted high-throughput sequencing of tagged nucleic acid samples
Matthias Meyer, Udo Stenzel, Sean Myles, Kay Prüfer, and Michael Hofreiter
Nucleic Acids Res. 2007; 35: e97. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
Novel zinc-based fixative for high quality DNA, RNA and protein analysis
Dimitrios Lykidis, Susan Van Noorden, Alan Armstrong, Bradley Spencer-Dene, Jie Li, Zhengping Zhuang, and Gordon W. H. Stamp
Nucleic Acids Res. 2007; 35: e85. [Abstract] [Full text] [Print PDF]  

Computational Biology
A statistical learning approach to the modeling of chromatographic retention of oligonucleotides incorporating sequence and secondary structure data
Marc Sturm, Sascha Quinten, Christian G. Huber, and Oliver Kohlbacher
Nucleic Acids Res. 2007; 35: 4195-4202. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
An in vitro selection scheme for oligonucleotide probes to discriminate between closely related DNA sequences
Ivan Brukner, Razan El-Ramahi, Izabella Gorska-Flipot, Maja Krajinovic, and Damian Labuda
Nucleic Acids Res. 2007; 35: e66. [Abstract] [Full text] [Print PDF]  

Molecular Biology
Recovery of bisulfite-converted genomic sequences in the methylation-sensitive QPCR
Kristofer Munson, Jarrod Clark, Katarzyna Lamparska-Kupsik, and Steven S. Smith
Nucleic Acids Res. 2007; 35: 2893-2903. [Abstract] [Full text] [Print PDF]  

Methods Online
Tentacle probes: eliminating false positives without sacrificing sensitivity
Brent C. Satterfield, Jay A.A. West, and Michael R. Caplan
Nucleic Acids Res. 2007; 35: e76. [Abstract] [Full text] [Print PDF]  

Methods Online
Real-time PCR mapping of DNaseI-hypersensitive sites using a novel ligation-mediated amplification technique
George A. Follows, Mary E. Janes, Ludovic Vallier, Anthony R. Green, and Berthold Gottgens
Nucleic Acids Res. 2007; 35: e56. [Abstract] [Full text] [Print PDF]  

Methods Online
High-resolution AFM imaging of single-stranded DNA-binding (SSB) protein—DNA complexes
Loïc Hamon, David Pastré, Pauline Dupaigne, Cyrille Le Breton, Eric Le Cam, and Olivier Piétrement
Nucleic Acids Res. 2007; 35: e58. [Abstract] [Full text] [Print PDF]  

Methods Online
Parallel gene synthesis in a microfluidic device
David S. Kong, Peter A. Carr, Lu Chen, Shuguang Zhang, and Joseph M. Jacobson
Nucleic Acids Res. 2007; 35: e61. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

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