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DNA characterisation
This category includes all new methods, or highly significant improvement thereof, for the biochemical and physical characterization of DNA. This includes DNA purification from various sources (e.g. ancient DNA, DNA from widely used hosts), DNA quantification, DNA analysis (by enzymatic, gel electrophoresis, mass-spectrometry, hybridization, assay) as well as determination of DNA sequences.
Citations 41-50 of 178 total displayed.
- Chemistry
Quantitative analysis of the oxidative DNA lesion, 2,2-diamino-4-(2-deoxy-ß-D-erythro-pentofuranosyl)amino]-5(2H)-oxazolone (oxazolone), in vitro and in vivo by isotope dilution-capillary HPLC-ESI-MS/MS
- Brock Matter, Danuta Malejka-Giganti, A. Saari Csallany, and Natalia Tretyakova
Nucleic Acids Res. 2006; 34: 5449-5460.
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[ Supplementary Data ]
- Methods Online
MMASS: an optimized array-based method for assessing CpG island methylation
- Ashraf E. K. Ibrahim, Natalie P. Thorne, Katie Baird, Nuno L. Barbosa-Morais, Simon Tavaré, V. Peter Collins, Andrew H. Wyllie, Mark J. Arends, and James D. Brenton
Nucleic Acids Res. 2006; 34: e136.
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- Computational Biology
Identification of core promoter modules in Drosophila and their application in accurate transcription start site prediction
- Uwe Ohler
Nucleic Acids Res. 2006; 34: 5943-5950.
[Abstract]
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- Methods Online
A simple DNA stretching method for fluorescence imaging of single DNA molecules
- Ting-Fung Chan, Connie Ha, Angie Phong, Dongmei Cai, Eunice Wan, Lucinda Leung, Pui-Yan Kwok, and Ming Xiao
Nucleic Acids Res. 2006; 34: e113.
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- Methods Online
A scalable method for multiplex LED-controlled synthesis of DNA in capillaries
- Sarah Blair, Kathryn Richmond, Matthew Rodesch, Michael Bassetti, and Franco Cerrina
Nucleic Acids Res. 2006; 34: e110.
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- Methods Online
Site-specific labeling of supercoiled DNA
- Alexander Y. Lushnikov, Vladimir N. Potaman, and Yuri L. Lyubchenko
Nucleic Acids Res. 2006; 34: e111.
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- Methods Online
A matrix of 3,4-diaminobenzophenone for the analysis of oligonucleotides by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
- Yu Fu, Songyun Xu, Chensong Pan, Mingliang Ye, Hanfa Zou, and Baochuan Guo
Nucleic Acids Res. 2006; 34: e94.
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- Methods Online
Purification and preconcentration of genomic DNA from whole cell lysates using photoactivated polycarbonate (PPC) microfluidic chips
- Malgorzata A. Witek, Shawn D. Llopis, Abigail Wheatley, Robin L. McCarley, and Steven A. Soper
Nucleic Acids Res. 2006; 34: e74.
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- Methods Online
Design of LNA probes that improve mismatch discrimination
- Yong You, Bernardo G. Moreira, Mark A. Behlke, and Richard Owczarzy
Nucleic Acids Res. 2006; 34: e60.
[Abstract]
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[ Supplementary Data ]
- Methods Online
Molecular beacons with intrinsically fluorescent nucleotides
- Angel A. Martí, Steffen Jockusch, Zengmin Li, Jingyue Ju, and Nicholas J. Turro
Nucleic Acids Res. 2006; 34: e50.
[Abstract]
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