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Genomics
This category presents new strategies for the genomic scale analyses. Examples include, but are not limited to, positional or whole genome cloning (e.g. using HAC, BAC, YAC, or P1 systems, see also CLONING), mapping, large scale sequencing, synteny characterization and the global evaluation of genes and their expression patterns (see also MONITORING GENE EXPRESSION). Strategies involve traditional molecular biology methods as well as new technologies such as arrays.
Citations 121-130 of 260 total displayed.
- Methods Online
Gene expression profiling of single cells on large-scale oligonucleotide arrays
- Claudia H. Hartmann and Christoph A. Klein
Nucleic Acids Res. 2006; 34: e143.
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- Methods Online
Generation of a mouse mutant by oligonucleotide-mediated gene modification in ES cells
- Marieke Aarts, Marleen Dekker, Sandra de Vries, Anja van der Wal, and Hein te Riele
Nucleic Acids Res. 2006; 34: e147.
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- Methods Online
A combinatorial approach to create artificial homing endonucleases cleaving chosen sequences
- Julianne Smith, Sylvestre Grizot, Sylvain Arnould, Aymeric Duclert, Jean-Charles Epinat, Patrick Chames, Jesús Prieto, Pilar Redondo, Francisco J. Blanco, Jerónimo Bravo, Guillermo Montoya, Frédéric Pâques, and Philippe Duchateau
Nucleic Acids Res. 2006; 34: e149.
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- Computational Biology
Identification of degenerate motifs using position restricted selection and hybrid ranking combination
- Chien-Hua Peng, Jeh-Ting Hsu, Yun-Sheng Chung, Yen-Jen Lin, Wei-Yuan Chow, D. Frank Hsu, and Chuan Yi Tang
Nucleic Acids Res. 2006; 34: 6379-6391.
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- Methods Online
Robust analysis of 5'-transcript ends (5'-RATE): a novel technique for transcriptome analysis and genome annotation
- Malali Gowda, Haumeng Li, Joe Alessi, Feng Chen, Richard Pratt, and Guo-Liang Wang
Nucleic Acids Res. 2006; 34: e126.
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- Methods Online
Analysis of protein sequence and interaction data for candidate disease gene prediction
- Richard A. George, Jason Y. Liu, Lina L. Feng, Robert J. Bryson-Richardson, Diane Fatkin, and Merridee A. Wouters
Nucleic Acids Res. 2006; 34: e130.
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- Methods Online
A high throughput method for genome-wide analysis of retroviral integration
- Julie Mantovani, Nathalie Holic, Kelly Martinez, Olivier Danos, and Javier Perea
Nucleic Acids Res. 2006; 34: e134.
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- Computational Biology
MetaGene: prokaryotic gene finding from environmental genome shotgun sequences
- Hideki Noguchi, Jungho Park, and Toshihisa Takagi
Nucleic Acids Res. 2006; 34: 5623-5630.
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- Methods Online
MMASS: an optimized array-based method for assessing CpG island methylation
- Ashraf E. K. Ibrahim, Natalie P. Thorne, Katie Baird, Nuno L. Barbosa-Morais, Simon Tavaré, V. Peter Collins, Andrew H. Wyllie, Mark J. Arends, and James D. Brenton
Nucleic Acids Res. 2006; 34: e136.
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- Computational Biology
Phage_Finder: Automated identification and classification of prophage regions in complete bacterial genome sequences
- Derrick E. Fouts
Nucleic Acids Res. 2006; 34: 5839-5851.
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