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Genomics
This category presents new strategies for the genomic scale analyses. Examples include, but are not limited to, positional or whole genome cloning (e.g. using HAC, BAC, YAC, or P1 systems, see also CLONING), mapping, large scale sequencing, synteny characterization and the global evaluation of genes and their expression patterns (see also MONITORING GENE EXPRESSION). Strategies involve traditional molecular biology methods as well as new technologies such as arrays.
Citations 151-160 of 260 total displayed.
- Methods Online
Single-cell chromosomal imbalances detection by array CGH
- Cedric Le Caignec, Claudia Spits, Karen Sermon, Martine De Rycke, Bernard Thienpont, Sophie Debrock, Catherine Staessen, Yves Moreau, Jean-Pierre Fryns, Andre Van Steirteghem, Inge Liebaers, and Joris R. Vermeesch
Nucleic Acids Res. 2006; 34: e68.
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- Methods Online
GREM, a technique for genome-wide isolation and quantitative analysis of promoter active repeats
- Anton Buzdin, Elena Kovalskaya-Alexandrova, Elena Gogvadze, and Eugene Sverdlov
Nucleic Acids Res. 2006; 34: e67.
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- Methods Online
Genomic analysis of insertion behavior and target specificity of mini-Tn7 and Tn3 transposons in Saccharomyces cerevisiae
- Michael Seringhaus, Anuj Kumar, John Hartigan, Michael Snyder, and Mark Gerstein
Nucleic Acids Res. 2006; 34: e57.
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- Methods Online
Algorithm for automatic genotype calling of single nucleotide polymorphisms using the full course of TaqMan real-time data
- A. Callegaro, R. Spinelli, L. Beltrame, S. Bicciato, L. Caristina, S. Censuales, G. De Bellis, and C. Battaglia
Nucleic Acids Res. 2006; 34: e56.
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- Methods Online
Tri-nucleotide threading for parallel amplification of minute amounts of genomic DNA
- Erik Pettersson, Mats Lindskog, Joakim Lundeberg, and Afshin Ahmadian
Nucleic Acids Res. 2006; 34: e49.
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- Articles
Spectral clustering of protein sequences
- Alberto Paccanaro, James A. Casbon, and Mansoor A. S. Saqi
Nucleic Acids Res. 2006; 34: 1571-1580.
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- Methods Online
New softwares for automated microsatellite marker development
- Wellington Martins, Daniel de Sousa, Karina Proite, Patrícia Guimarães, Marcio Moretzsohn, and David Bertioli
Nucleic Acids Res. 2006; 34: e31.
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- Methods Online
Genotyping pooled DNA using 100K SNP microarrays: a step towards genomewide association scans
- Emma Meaburn, Lee M. Butcher, Leonard C. Schalkwyk, and Robert Plomin
Nucleic Acids Res. 2006; 34: e28.
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- Methods Online
A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria
- Hong-Yu Ou, Ling-Ling Chen, James Lonnen, Roy R. Chaudhuri, Ali Bin Thani, Rebecca Smith, Natalie J. Garton, Jay Hinton, Mark Pallen, Michael R. Barer, and Kumar Rajakumar
Nucleic Acids Res. 2006; 34: e3.
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- Methods Online
Human and mouse oligonucleotide-based array CGH
- Paul van den IJssel, Marianne Tijssen, Suet-Feung Chin, Paul Eijk, Beatriz Carvalho, Erik Hopmans, Henne Holstege, Dhinoth Kumar Bangarusamy, Jos Jonkers, Gerrit A. Meijer, Carlos Caldas, and Bauke Ylstra
Nucleic Acids Res. 2005; 33: e192.
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