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Microarray
This category represents novel strategies for manufacturing and screening microarrays and for evaluating generated data. Of necessity, areas might overlap those of Genomics, Monitoring Gene Expression, Polymorphism/mutation detection, and/or Computational Methods.
Citations 61-70 of 161 total displayed.
- Methods Online
Controlled loading of oligodeoxyribonucleotide monolayers onto unoxidized crystalline silicon; fluorescence-based determination of the surface coverage and of the hybridization efficiency; parallel imaging of the process by Atomic Force Microscopy
- Fabrizio Cattaruzza, Antonio Cricenti, Alberto Flamini, Marco Girasole, Giovanni Longo, Tommaso Prosperi, Giuseppina Andreano, Luciano Cellai, and Emanuele Chirivino
Nucleic Acids Res. 2006; 34: e32.
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- Methods Online
On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes
- Lukas M. Wick, Jean Marie Rouillard, Thomas S. Whittam, Erdogan Gulari, James M. Tiedje, and Syed A. Hashsham
Nucleic Acids Res. 2006; 34: e26.
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- Methods Online
BTA, a novel reagent for DNA attachment on glass and efficient generation of solid-phase amplified DNA colonies
- Milan Fedurco, Anthony Romieu, Scott Williams, Isabelle Lawrence, and Gerardo Turcatti
Nucleic Acids Res. 2006; 34: e22.
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- Methods Online
Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operons
- Bettina Harr and Christian Schlötterer
Nucleic Acids Res. 2006; 34: e8.
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- Articles
Microarray-based DNA methylation profiling: technology and applications
- Axel Schumacher, Philipp Kapranov, Zachary Kaminsky, James Flanagan, Abbas Assadzadeh, Patrick Yau, Carl Virtanen, Neil Winegarden, Jill Cheng, Thomas Gingeras, and Arturas Petronis
Nucleic Acids Res. 2006; 34: 528-542.
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- Methods Online
Rapid quantitative profiling of complex microbial populations
- Chana Palmer, Elisabeth M. Bik, Michael B. Eisen, Paul B. Eckburg, Theodore R. Sana, Paul K. Wolber, David A. Relman, and Patrick O. Brown
Nucleic Acids Res. 2006; 34: e5.
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- Methods Online
TaqMan probe array for quantitative detection of DNA targets
- Heping Liu, Hong Wang, Zhiyang Shi, Hua Wang, Chaoyong Yang, Spering Silke, Weihong Tan, and Zuhong Lu
Nucleic Acids Res. 2006; 34: e4.
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- Articles
A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus
- Maureen A. Sartor, Aaron M. Zorn, Jennifer A. Schwanekamp, Danielle Halbleib, Saikumar Karyala, Michael L. Howell, Gary E. Dean, Mario Medvedovic, and Craig R. Tomlinson
Nucleic Acids Res. 2006; 34: 185-200.
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- Methods Online
Use of a mixed tissue RNA design for performance assessments on multiple microarray formats
- Karol L. Thompson, Barry A. Rosenzweig, P. Scott Pine, Jacques Retief, Yaron Turpaz, Cynthia A. Afshari, Hisham K. Hamadeh, Michael A. Damore, Michael Boedigheimer, Eric Blomme, Rita Ciurlionis, Jeffrey F. Waring, James C. Fuscoe, Richard Paules, Charles J. Tucker, Thomas Fare, Ernest M. Coffey, Yudong He, Patrick J. Collins, Kurt Jarnagin, Susan Fujimoto, Brigitte Ganter, Gretchen Kiser, Tamma Kaysser-Kranich, Joseph Sina, and Frank D. Sistare
Nucleic Acids Res. 2005; 33: e187.
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- Methods Online
Human and mouse oligonucleotide-based array CGH
- Paul van den IJssel, Marianne Tijssen, Suet-Feung Chin, Paul Eijk, Beatriz Carvalho, Erik Hopmans, Henne Holstege, Dhinoth Kumar Bangarusamy, Jos Jonkers, Gerrit A. Meijer, Carlos Caldas, and Bauke Ylstra
Nucleic Acids Res. 2005; 33: e192.
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