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Monitoring gene expression
This category incorporates new techniques for detecting expression of specific genes or for following the simultaneous expression of many genes. Methods allowing the identification of new genes based on their expression patterns are also presented. Significant changes to standard methods (hybridization, cDNA libraries, subtracted hybridization) as well as new global strategies (RDA, DDRT-PCR, SAGE, arrays) are presented.
Citations 21-30 of 134 total displayed.
- Methods Online
Target accessibility and signal specificity in live-cell detection of BMP-4 mRNA using molecular beacons
- Won Jong Rhee, Philip J. Santangelo, Hanjoong Jo, and Gang Bao
Nucleic Acids Res. 2008; 36: e30.
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- Methods Online
An engineered L-arginine sensor of Chlamydia pneumoniae enables arginine-adjustable transcription control in mammalian cells and mice
- Shizuka Hartenbach, Marie Daoud-El Baba, Wilfried Weber, and Martin Fussenegger
Nucleic Acids Res. 2007; 35: e136.
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- Methods Online
Avoiding false-positive signals with nuclease-vulnerable molecular beacons in single living cells
- Antony K. Chen, Mark A. Behlke, and Andrew Tsourkas
Nucleic Acids Res. 2007; 35: e105.
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- Methods Online
Molecular restoration of archived transcriptional profiles by complementary-template reverse-transcription (CT-RT)
- Olivier Loudig, Ekaterina Milova, Margaret Brandwein-Gensler, Aldo Massimi, Thomas J. Belbin, Geoffrey Childs, Robert H. Singer, Thomas Rohan, and Michael B. Prystowsky
Nucleic Acids Res. 2007; 35: e94.
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- Molecular Biology
Chromosome-specific and noisy IFNB1 transcription in individual virus-infected human primary dendritic cells
- Jianzhong Hu, Stuart C. Sealfon, Fernand Hayot, Ciriyam Jayaprakash, Madhu Kumar, Audrey C. Pendleton, Arnaud Ganee, Ana Fernandez-Sesma, Thomas M. Moran, and James G. Wetmur
Nucleic Acids Res. 2007; 35: 5232-5241.
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- Genomics
iGentifier: indexing and large-scale profiling of unknown transcriptomes
- Achim Fischer, Alistair Lenhard, Heike Tronecker, Yvonne Lorat, Marcel Kraenzle, Oliver Sorgenfrei, Tim Zeppenfeld, Michael Haushalter, Gerhard Vogt, Ulrich Gruene, Annette Meyer, Ulrich Handlbichler, Patrick Schweizer, and Leo Gaelweiler
Nucleic Acids Res. 2007; 35: 4640-4648.
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- Methods Online
An adaptation of the LMS method to determine expression variations in profiling data
- Paul Chuchana, Dorian Marchand, Mélanie Nugoli, Carmen Rodriguez, Nicolas Molinari, and Jose A. Garcia-Sanz
Nucleic Acids Res. 2007; 35: e71.
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- Methods Online
Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector
- Simon Fredriksson, Johan Banér, Fredrik Dahl, Angela Chu, Hanlee Ji, Katrina Welch, and Ronald W. Davis
Nucleic Acids Res. 2007; 35: e47.
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- Computational Biology
Graph-based identification of cancer signaling pathways from published gene expression signatures using PubLiME
- Giacomo Finocchiaro, Francesco Mattia Mancuso, Davide Cittaro, and Heiko Muller
Nucleic Acids Res. 2007; 35: 2343-2355.
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- RNA
Translational control and target recognition by Escherichia coli small RNAs in vivo
- Johannes H. Urban and Jörg Vogel
Nucleic Acids Res. 2007; 35: 1018-1037.
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