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Monitoring gene expression
This category incorporates new techniques for detecting expression of specific genes or for following the simultaneous expression of many genes. Methods allowing the identification of new genes based on their expression patterns are also presented. Significant changes to standard methods (hybridization, cDNA libraries, subtracted hybridization) as well as new global strategies (RDA, DDRT-PCR, SAGE, arrays) are presented.
Citations 31-40 of 134 total displayed.
- Molecular Biology
Transcription factor distribution in Escherichia coli: studies with FNR protein
- David C. Grainger, Hirofumi Aiba, Douglas Hurd, Douglas F. Browning, and Stephen J. W. Busby
Nucleic Acids Res. 2007; 35: 269-278.
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- Computational Biology
Nonlinear differential equation model for quantification of transcriptional regulation applied to microarray data of Saccharomyces cerevisiae
- Tra Thi Vu and Jiri Vohradsky
Nucleic Acids Res. 2007; 35: 279-287.
[Abstract]
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- Methods Online
Gene expression profiling of single cells on large-scale oligonucleotide arrays
- Claudia H. Hartmann and Christoph A. Klein
Nucleic Acids Res. 2006; 34: e143.
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- Methods Online
A bichromatic fluorescent reporter for cell-based screens of alternative splicing
- James P. Orengo, Donnie Bundman, and Thomas A. Cooper
Nucleic Acids Res. 2006; 34: e148.
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- Computational Biology
Identification of degenerate motifs using position restricted selection and hybrid ranking combination
- Chien-Hua Peng, Jeh-Ting Hsu, Yun-Sheng Chung, Yen-Jen Lin, Wei-Yuan Chow, D. Frank Hsu, and Chuan Yi Tang
Nucleic Acids Res. 2006; 34: 6379-6391.
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- Methods Online
Robust analysis of 5'-transcript ends (5'-RATE): a novel technique for transcriptome analysis and genome annotation
- Malali Gowda, Haumeng Li, Joe Alessi, Feng Chen, Richard Pratt, and Guo-Liang Wang
Nucleic Acids Res. 2006; 34: e126.
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- Methods Online
DeepSAGE—digital transcriptomics with high sensitivity, simple experimental protocol and multiplexing of samples
- Kåre L. Nielsen, Annabeth Laursen Høgh, and Jeppe Emmersen
Nucleic Acids Res. 2006; 34: e133.
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- Methods Online
Fluorescent T7 display phages obtained by translational frameshift
- Erik J. Slootweg, Hans J.H.G. Keller, Mark A. Hink, Jan Willem Borst, Jaap Bakker, and Arjen Schots
Nucleic Acids Res. 2006; 34: e137.
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- Methods Online
Identifying functional gene sets from hierarchically clustered expression data: map of abiotic stress regulated genes in Arabidopsis thaliana
- Matti Kankainen, Günter Brader, Petri Törönen, E. Tapio Palva, and Liisa Holm
Nucleic Acids Res. 2006; 34: e124.
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- Methods Online
EASI—enrichment of alternatively spliced isoforms
- Julian P. Venables and John Burn
Nucleic Acids Res. 2006; 34: e103.
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