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Monitoring gene expression


This category incorporates new techniques for detecting expression of specific genes or for following the simultaneous expression of many genes. Methods allowing the identification of new genes based on their expression patterns are also presented. Significant changes to standard methods (hybridization, cDNA libraries, subtracted hybridization) as well as new global strategies (RDA, DDRT-PCR, SAGE, arrays) are presented.


Citations 41-50 of 134 total displayed.

Past content

Articles
Genome-wide screening for cis-regulatory variation using a classical diallel crossing scheme
Raphaël Kiekens, Annelies Vercauteren, Beatrijs Moerkerke, Els Goetghebeur, Hilde Van Den Daele, Roel Sterken, Martin Kuiper, Fred van Eeuwijk, and Marnik Vuylsteke
Nucleic Acids Res. 2006; 34: 3677-3686. [Abstract] [Full text] [Print PDF] [ Supplementary data ]  

Methods Online
MicroRNA enrichment among short ‘ultraconserved’ sequences in insects
T. Tran, P. Havlak, and J. Miller
Nucleic Acids Res. 2006; 34: e65. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
A novel magnetic resonance-based method to measure gene expression in living cells
Sewon Ki, Fuminori Sugihara, Koji Kasahara, Hidehito Tochio, Azusa Okada-Marubayashi, Setsuko Tomita, Masahito Morita, Mitsunori Ikeguchi, Masahiro Shirakawa, and Tetsuro Kokubo
Nucleic Acids Res. 2006; 34: e51. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Articles
A data-driven clustering method for time course gene expression data
Ping Ma, Cristian I. Castillo-Davis, Wenxuan Zhong, and Jun S. Liu
Nucleic Acids Res. 2006; 34: 1261-1269. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
A translation control reporter system (TCRS) for the analysis of translationally controlled processes in the vertebrate cell
Volker Wiesenthal, Achim Leutz, and Cornelis F. Calkhoven
Nucleic Acids Res. 2006; 34: e23. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
Computational inference and experimental validation of the nitrogen assimilation regulatory network in cyanobacterium Synechococcus sp. WH 8102
Zhengchang Su, Fenglou Mao, Phuongan Dam, Hongwei Wu, Victor Olman, Ian T. Paulsen, Brian Palenik, and Ying Xu
Nucleic Acids Res. 2006; 34: 1050-1065. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
MicroRNA expression profiling of single whole embryonic stem cells
Fuchou Tang, Petra Hajkova, Sheila C. Barton, Kaiqin Lao, and M. Azim Surani
Nucleic Acids Res. 2006; 34: e9. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Multiplexed tandem PCR: gene profiling from small amounts of RNA using SYBR Green detection
Keith K. Stanley and Elektra Szewczuk
Nucleic Acids Res. 2005; 33: e180. [Abstract] [Full text] [Print PDF]  

Methods Online
Gene CATCHR—Gene Cloning And Tagging for Caenorhabditis elegans using yeast Homologous Recombination: a novel approach for the analysis of gene expression
Holly E. Sassi, Stephanie Renihan, Andrew M. Spence, and Ramona L. Cooperstock
Nucleic Acids Res. 2005; 33: e163. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Method for multiplex cellular detection of mRNAs using quantum dot fluorescent in situ hybridization
PokMan Chan, Tony Yuen, Frederique Ruf, Javier Gonzalez-Maeso, and Stuart C. Sealfon
Nucleic Acids Res. 2005; 33: e161. [Abstract] [Full text] [Print PDF]  

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