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Monitoring gene expression


This category incorporates new techniques for detecting expression of specific genes or for following the simultaneous expression of many genes. Methods allowing the identification of new genes based on their expression patterns are also presented. Significant changes to standard methods (hybridization, cDNA libraries, subtracted hybridization) as well as new global strategies (RDA, DDRT-PCR, SAGE, arrays) are presented.


Citations 51-60 of 134 total displayed.

Past content

Methods Online
Isolation of mRNA from specific tissues of Drosophila by mRNA tagging
Zhiyong Yang, Howard J. Edenberg, and Ronald L. Davis
Nucleic Acids Res. 2005; 33: e148. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
Human-zebrafish non-coding conserved elements act in vivo to regulate transcription
Jordan T. Shin, James R. Priest, Ivan Ovcharenko, Amy Ronco, Rachel K. Moore, C. Geoffrey Burns, and Calum A. MacRae
Nucleic Acids Res. 2005; 33: 5437-5445. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
A novel transcriptome subtraction method for the detection of differentially expressed genes in highly complex eukaryotes
L. Li, D. Techel, N. Gretz, and A. Hildebrandt
Nucleic Acids Res. 2005; 33: e136. [Abstract] [Full text] [Print PDF]  

Articles
Interplay between GCN2 and GCN4 expression, translation elongation factor 1 mutations and translational fidelity in yeast
Tanya Magazinnik, Monika Anand, Evelyn Sattlegger, Alan G. Hinnebusch, and Terri Goss Kinzy
Nucleic Acids Res. 2005; 33: 4584-4592. [Abstract] [Full text] [Print PDF]  

Methods Online
Cell-type-specific transcriptomics in chimeric models using transcriptome-based masks
Felix Naef and Joerg Huelsken
Nucleic Acids Res. 2005; 33: e111. [Abstract] [Full text] [Print PDF]  

Articles
Mapping of transcription start sites in Saccharomyces cerevisiae using 5' SAGE
Zhihong Zhang and Fred S. Dietrich
Nucleic Acids Res. 2005; 33: 2838-2851. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
Identification of brassinosteroid-related genes by means of transcript co-response analyses
Janina Lisso, Dirk Steinhauser, Thomas Altmann, Joachim Kopka, and Carsten Müssig
Nucleic Acids Res. 2005; 33: 2685-2696. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Effective transcriptome amplification for expression profiling on sense-oriented oligonucleotide microarrays
Joerg Schlingemann, Olaf Thuerigen, Carina Ittrich, Grischa Toedt, Heidi Kramer, Meinhard Hahn, and Peter Lichter
Nucleic Acids Res. 2005; 33: e29. [Abstract] [Full text] [Print PDF]  

Methods Online
Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system
Dominic C. Voon, Lily S. Subrata, Svetlana Baltic, Marco P. Leu, Joanna M. Whiteway, Agnes Wong, Samuel A. Knight, Frank T. Christiansen, and John M. Daly
Nucleic Acids Res. 2005; 33: e27. [Abstract] [Full text] [Print PDF]  

Methods Online
Reproducibility, bioinformatic analysis and power of the SAGE method to evaluate changes in transcriptome
S. Dinel, C. Bolduc, P. Belleau, A. Boivin, M. Yoshioka, E. Calvo, B. Piedboeuf, E. E. Snyder, F. Labrie, and J. St-Amand
Nucleic Acids Res. 2005; 33: e26. [Abstract] [Full text] [Print PDF]  

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