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Protein-protein interaction


This category describes methods using nucleic acids for the analysis of protein-protein interactions or methods specifically suited for the analysis of interactions between proteins involved in nucleic acid function. This includes, but is not limited to, two-hybrid system, surface display, arrays, generation of mutant libraries.


Citations 1-10 of 33 total displayed.

Most recent content

Methods Online
An optimized split-ubiquitin cDNA-library screening system to identify novel interactors of the human Frizzled 1 receptor
Dietmar Dirnberger, Monika Messerschmid, and Ralf Baumeister
Nucleic Acids Res. 2008; 36: e37. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Past content

Methods Online
Protein evolution by hypermutation and selection in the B cell line DT40
Hiroshi Arakawa, Hiroaki Kudo, Vera Batrak, Randolph B. Caldwell, Michael A. Rieger, Joachim W. Ellwart, and Jean-Marie Buerstedde
Nucleic Acids Res. 2008; 36: e1. [Abstract] [Full text] [Print PDF]  

Methods Online
High-precision mapping of protein–protein interfaces: an integrated genetic strategy combining en masse mutagenesis and DNA-level parallel analysis on a yeast two-hybrid platform
Maria Pajunen, Hilkka Turakainen, Eini Poussu, Johan Peränen, Mauno Vihinen, and Harri Savilahti
Nucleic Acids Res. 2007; 35: e103. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Protein–protein interaction analysis by C-terminally specific fluorescence labeling and fluorescence cross-correlation spectroscopy
Rieko Oyama, Hideaki Takashima, Masato Yonezawa, Nobuhide Doi, Etsuko Miyamoto-Sato, Masataka Kinjo, and Hiroshi Yanagawa
Nucleic Acids Res. 2006; 34: e102. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Articles
Protein binding site prediction using an empirical scoring function
Shide Liang, Chi Zhang, Song Liu, and Yaoqi Zhou
Nucleic Acids Res. 2006; 34: 3698-3707. [Abstract] [Full text] [Print PDF]  

Articles
The WD40-repeat protein Pwp1p associates in vivo with 25S ribosomal chromatin in a histone H4 tail-dependent manner
Noriyuki Suka, Emiko Nakashima, Kaori Shinmyozu, Masumi Hidaka, and Hisato Jingami
Nucleic Acids Res. 2006; 34: 3555-3567. [Abstract] [Full text] [Print PDF]  

Articles
Protein complex compositions predicted by structural similarity
Fred P. Davis, Hannes Braberg, Min-Yi Shen, Ursula Pieper, Andrej Sali, and M.S. Madhusudhan
Nucleic Acids Res. 2006; 34: 2943-2952. [Abstract] [Full text] [Print PDF]  

Articles
Yeast Protein Interactome topology provides framework for coordinated-functionality
André X. C. N. Valente and Michael E. Cusick
Nucleic Acids Res. 2006; 34: 2812-2819. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
The initial step of DNA hairpin folding: a kinetic analysis using fluorescence correlation spectroscopy
Jiho Kim, Sören Doose, Hannes Neuweiler, and Markus Sauer
Nucleic Acids Res. 2006; 34: 2516-2527. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
Proximity ligation assays with peptide conjugate ‘burrs’ for the sensitive detection of spores
Supriya Pai, Andrew D. Ellington, and Matthew Levy
Nucleic Acids Res. 2005; 33: e162. [Abstract] [Full text] [Print PDF]  

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