RNA characterisation and manipulation

Citations 1-10 of 112 total displayed.

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Methods Online
Performance comparison between k-tuple distance and four model-based distances in phylogenetic tree reconstruction

Kuan Yang and Liqing Zhang
Nucleic Acids Res. 2008; 36: e33. [Abstract] [Full text] [Print PDF]  

Past content

Methods Online
A novel method for poly(A) fractionation reveals a large population of mRNAs with a short poly(A) tail in mammalian cells

Hedda A. Meijer, Martin Bushell, Kirsti Hill, Timothy W. Gant, Anne E. Willis, Peter Jones, and Cornelia H. de Moor
Nucleic Acids Res. 2007; 35: e132. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Methods Online
A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons

Anne-Laure Chateigner-Boutin and Ian Small
Nucleic Acids Res. 2007; 35: e114. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Surveillance of siRNA integrity by FRET imaging

Anne Järve, Julius Müller, Il-Han Kim, Karl Rohr, Caroline MacLean, Gert Fricker, Ulrich Massing, Florian Eberle, Alexander Dalpke, Roger Fischer, Michael F. Trendelenburg, and Mark Helm
Nucleic Acids Res. 2007; 35: e124. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

RNA
Identification of recognition residues for ligation-based detection and quantitation of pseudouridine and N⁶-methyladenosine

Qing Dai, Robert Fong, Mridusmita Saikia, David Stephenson, Yi-tao Yu, Tao Pan, and Joseph A. Piccirilli
Nucleic Acids Res. 2007; 35: 6322-6329. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Computational Biology
A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing

Debopriya Das, Tyson A. Clark, Anthony Schweitzer, Miki Yamamoto, Henry Marr, Josh Arribere, Simon Minovitsky, Alexander Poliakov, Inna Dubchak, John E. Blume, and John G. Conboy
Nucleic Acids Res. 2007; 35: 4845-4857. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

RNA
Use of a novel Förster resonance energy transfer method to identify locations of site-bound metal ions in the U2–U6 snRNA complex

Faqing Yuan, Laura Griffin, LauraJane Phelps, Volker Buschmann, Kenneth Weston, and Nancy L. Greenbaum
Nucleic Acids Res. 2007; 35: 2833-2845. [Abstract] [Full text] [Print PDF]  

Computational Biology
RNAmmer: consistent and rapid annotation of ribosomal RNA genes

Karin Lagesen, Peter Hallin, Einar Andreas Rødland, Hans-Henrik Stærfeldt, Torbjørn Rognes, and David W. Ussery
Nucleic Acids Res. 2007; 35: 3100-3108. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Subtractive hybridization identifies novel differentially expressed ncRNA species in EBV-infected human B cells

Jan Mrázek, Simone B. Kreutmayer, Friedrich A. Grässer, Norbert Polacek, and Alexander Hüttenhofer
Nucleic Acids Res. 2007; 35: e73. [Abstract] [Full text] [Print PDF]  

Computational Biology
Non-EST-based prediction of novel alternatively spliced cassette exons with cell signaling function in Caenorhabditis elegans and human

German Gaston Leparc and Robi David Mitra
Nucleic Acids Res. 2007; 35: 3192-3202. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

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