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RNA characterisation and manipulation


This category presents all methods to analyze RNA including, but not limited to, RNA production, enzymatic treatment of RNA, RNA sequencing and probing, strategies involving ribozymes, biophysical methods for the characterization of RNA.


Citations 51-60 of 141 total displayed.

Past content

Methods Online
Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing
Hitoshi Suzuki, Yuhong Zuo, Jinhua Wang, Michael Q. Zhang, Arun Malhotra, and Akila Mayeda
Nucleic Acids Res. 2006; 34: e63. [Abstract] [Full text] [Print PDF]  

Articles
Automated extraction and classification of RNA tertiary structure cyclic motifs
Sébastien Lemieux and François Major
Nucleic Acids Res. 2006; 34: 2340-2346. [Abstract] [Full text] [Print PDF] [ Supplementary Data ]  

Articles
Proteins surrounding hairpin IIIe of the hepatitis C virus internal ribosome entry site on the human 40S ribosomal subunit
Elena Laletina, Dmitri Graifer, Alexey Malygin, Anton Ivanov, Ivan Shatsky, and Galina Karpova
Nucleic Acids Res. 2006; 34: 2027-2036. [Abstract] [Full text] [Print PDF]  

Articles
Computer simulation of chaperone effects of Archaeal C/D box sRNA binding on rRNA folding
Ruud J. W. Schoemaker and Alexander P. Gultyaev
Nucleic Acids Res. 2006; 34: 2015-2026. [Abstract] [Full text] [Print PDF]  

Methods Online
In vitro selection of tRNAs for efficient four-base decoding to incorporate non-natural amino acids into proteins in an Escherichia coli cell-free translation system
Hikaru Taira, Takahiro Hohsaka, and Masahiko Sisido
Nucleic Acids Res. 2006; 34: e44. [Abstract] [Full text] [Print PDF]  

Methods Online
Isolation of a site-specifically modified RNA from an unmodified transcript
Ya-Ming Hou, Zhi Li, and Howard Gamper
Nucleic Acids Res. 2006; 34: e21. [Abstract] [Full text] [Print PDF]  

Articles
TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase
David H. Ardell and Siv G. E. Andersson
Nucleic Acids Res. 2006; 34: 893-904. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
Rampant polyuridylylation of plastid gene transcripts in the dinoflagellate Lingulodinium
Yunling Wang and David Morse
Nucleic Acids Res. 2006; 34: 613-619. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
Characterization of sequences and mechanisms through which ISE/ISS-3 regulates FGFR2 splicing
Ruben H. Hovhannisyan, Claude C. Warzecha, and Russ P. Carstens
Nucleic Acids Res. 2006; 34: 373-385. [Abstract] [Full text] [Print PDF]  

Methods Online
Four-base codon mediated mRNA display to construct peptide libraries that contain multiple nonnatural amino acids
Norihito Muranaka, Takahiro Hohsaka, and Masahiko Sisido
Nucleic Acids Res. 2006; 34: e7. [Abstract] [Full text] [Print PDF]  

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