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RNA characterisation and manipulation


This category presents all methods to analyze RNA including, but not limited to, RNA production, enzymatic treatment of RNA, RNA sequencing and probing, strategies involving ribozymes, biophysical methods for the characterization of RNA.


Citations 61-70 of 141 total displayed.

Past content

Articles
Fluorescence of covalently attached pyrene as a general RNA folding probe
Mary K. Smalley and Scott K. Silverman
Nucleic Acids Res. 2006; 34: 152-166. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Articles
Identification of a 14mer RNA that recognizes and binds flavin mononucleotide with high affinity
Peter C. Anderson and Sandro Mecozzi
Nucleic Acids Res. 2005; 33: 6992-6999. [Abstract] [Full text] [Print PDF]  

Methods Online
A novel experimental approach for systematic identification of box H/ACA snoRNAs from eukaryotes
Ai-Di Gu, Hui Zhou, Chun-Hong Yu, and Liang-Hu Qu
Nucleic Acids Res. 2005; 33: e194. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Bis-aptazyme sensors for hepatitis C virus replicase and helicase without blank signal
Suhyung Cho, Ji-Eun Kim, Bo-Rahm Lee, June-Hyung Kim, and Byung-Gee Kim
Nucleic Acids Res. 2005; 33: e177. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Species-independent detection of RNA virus by representational difference analysis using non-ribosomal hexanucleotides for reverse transcription
Daiji Endoh, Tetsuya Mizutani, Rikio Kirisawa, Yoshiyuki Maki, Hidetoshi Saito, Yasuhiro Kon, Shigeru Morikawa, and Masanobu Hayashi
Nucleic Acids Res. 2005; 33: e65. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces
Sandrine Imbeaud, Esther Graudens, Virginie Boulanger, Xavier Barlet, Patrick Zaborski, Eric Eveno, Odilo Mueller, Andreas Schroeder, and Charles Auffray
Nucleic Acids Res. 2005; 33: e56. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
A GFP-based reporter system to monitor nonsense-mediated mRNA decay
Alexandra Paillusson, Nadine Hirschi, Claudio Vallan, Claus M. Azzalin, and Oliver Mühlemann
Nucleic Acids Res. 2005; 33: e54. [Abstract] [Full text] [Print PDF]  

Methods Online
A microarray configuration to quantify expression levels and relative abundance of splice variants
Pascale Fehlbaum, Caroline Guihal, Laurent Bracco, and Olivier Cochet
Nucleic Acids Res. 2005; 33: e47. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Development of an automated in vitro selection protocol to obtain RNA-based aptamers: identification of a biostable substance P antagonist
Dirk Eulberg, Klaus Buchner, Christian Maasch, and Sven Klussmann
Nucleic Acids Res. 2005; 33: e45. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

Methods Online
Targeted ‘knockdown’ of spliceosome function in mammalian cells
Nathalie Matter and Harald König
Nucleic Acids Res. 2005; 33: e41. [Abstract] [Full text] [Print PDF] [ Supplementary Material ]  

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