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Nucleic Acids Research, 1983, Vol. 11, No. 21 7487-7504
© 1983


CHEMISTRY

Studies of the interaction of RecA protein with DNA

D.F. Dombroski, D.G. Scraba, R.D. Bradley and A.R. Morgan

Department of Biochemistry, University of Alberta Edmonton, Alberta, T6G 2H7, Canada

Received June 28, 1983. Revised September 28, 1983. Accepted September 28, 1983.

Ethidium fluorescence assays were adapted for the rapid and sensitive detection of precA; in addition, fluorescence measurements on binding precA to linear, OC and CCC PM2 DNAs have enabled the 8toichiometry of precA binding as well as the precA-lnduced unwinding angle of DNA to be determined. The stoichiom-etry of binding was independently confirmed by sedimentation analysis to be one precA molecule per 3 bp. The unwinding angle was also independently confirmed by measurements of fluorescence changes induced by the binding of precA to CCC DNA which was relaxed by topoisomerase to give a precA-induced unwinding angle of 51°. Electron microscopy of OC DHA molecules which bound non-saturating amounts of precA revealed that the length increase in DNA due to precA was approximately 55%. Finally, examination of negatively stained precA complexes with a variety of linear DNAs showed that the minor groove is the primary site of interaction for this protein.


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