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Nucleic Acids Research, 1984, Vol. 12, No. 1Part1 141-148
© 1984

MAIN-FRAME COMPUTERS

16S rRNA oligonucleotide catalog data base

James M. Sobieski, Kwang Nan Chen*, Jay C. Filiatreau*, Mark H. Pickett* and George E. Fox*

University of Houston Computing Center, University Park Houston, TX 77004, USA *Department of Biochemical and Biophysical Sciences, University of Houston, University Park Houston, TX 77004, USA

Received August 17, 1983. We have developed a package of programs to create, maintain and manipulate a data base of 16S rRNA oligonucleotide catalog data. For the first time all the published catalog data is brought together in one olace in a readily usable form. The package allows generation of dendrograms, facilitates searches for related oligonucleotides between catalogs, and allows construction of global and local dictionaries. Interactive capabilities allow for searches of the dictionary as well as an associated file of likely oligonucleotide families.


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