Nucleic Acids Research, 1986, Vol. 14, No. 20 8061-8071
© 1986
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Cloning and sequencing of chloroperoxidase cDNA4
Roger Adams Laboratory, Department of Biochemistry, University of Illinois Urbana, IL 61801, USA
Received September 2, 1986. Accepted September 22, 1986.
An oligod-d(T)1218 primed cDNA library has been prepared from CaldaHo-myces fumago mRNA. A clone containing a full-length Insert was sequenced on the supercoiled plasmid, pBR322. The complete primary sequence of chloroper-oxidase has been derived. We have also determined about 73% of the peptide sequence by amino add sequencing. The DNA sequence data matches all of the available known peptide sequences. The mature polypeptide contains 300 amino adds having a combined molecular weight of 32, 974 daltons. A putative signal peptide of 21 amino adds is proposed from DNA sequence data. The chloroper-oxidase gene encodes three potential glycosylation sites recognized as Asn-X-Thr/Ser sequences. Three cysteine residues are found 1n the protein sequence. A small region around Cys87 bears a minimal homology to the active site of cytochrome P450cam. No other heme protein homologues can be detected. We propose that Cys87 serves as a thiolate ligand to the iron of heme prosthetic group. A rare arginine codon, AGG, is used three times out of twelve in contrast to the very infrequent use of this codon in E. coli or yeast.
1Present address: Department of Agronomy, USDA Physiology Laboratory, University of Illinois, Urbana, IL 61801
2Present address: Department of Biochemistry, National Institutes of Health-NHLBI, Room 102 Bldg.3, Bethesda, MD 20205
3Present address: Laboratory of Molecules Genetics, Gerontology research Center, 4940 Eastern Avenue, Baltimore, MD 21224, USA
*This work was supported by grants from the National Scheme Foundation, DMB 85-03599 and the National Institutes of Health, GM 07768
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