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Nucleic Acids Research, 1986, Vol. 14, No. 20 8061-8071
© 1986


Articles

Cloning and sequencing of chloroperoxidase cDNA4

Guo-Hua Fang, Paul Kenigsberg1, Milton.J Axley2, Mark Nuell3 and Lowell.P Hager

Roger Adams Laboratory, Department of Biochemistry, University of Illinois Urbana, IL 61801, USA

Received September 2, 1986. Accepted September 22, 1986.

An oligod-d(T)12–18 primed cDNA library has been prepared from CaldaHo-myces fumago mRNA. A clone containing a full-length Insert was sequenced on the supercoiled plasmid, pBR322. The complete primary sequence of chloroper-oxidase has been derived. We have also determined about 73% of the peptide sequence by amino add sequencing. The DNA sequence data matches all of the available known peptide sequences. The mature polypeptide contains 300 amino adds having a combined molecular weight of 32, 974 daltons. A putative signal peptide of 21 amino adds is proposed from DNA sequence data. The chloroper-oxidase gene encodes three potential glycosylation sites recognized as Asn-X-Thr/Ser sequences. Three cysteine residues are found 1n the protein sequence. A small region around Cys87 bears a minimal homology to the active site of cytochrome P450cam. No other heme protein homologues can be detected. We propose that Cys87 serves as a thiolate ligand to the iron of heme prosthetic group. A rare arginine codon, AGG, is used three times out of twelve in contrast to the very infrequent use of this codon in E. coli or yeast.


1Present address: Department of Agronomy, USDA Physiology Laboratory, University of Illinois, Urbana, IL 61801

2Present address: Department of Biochemistry, National Institutes of Health-NHLBI, Room 102 Bldg.3, Bethesda, MD 20205

3Present address: Laboratory of Molecules Genetics, Gerontology research Center, 4940 Eastern Avenue, Baltimore, MD 21224, USA

*This work was supported by grants from the National Scheme Foundation, DMB 85-03599 and the National Institutes of Health, GM 07768


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