Nucleic Acids Research, 1989, Vol. 17, No. 13 5107-5115
© 1989
MOLECULAR BIOLOGY |
-DNA IX: parallel annealing of
-anomeric oligodeoxyribonucleotides to natural mRNA is required for interference in RNase H mediated hydrolysis and reverse transcription
Laboratoire de Biochimk des Proteines UA 1191 CNRS 1Laboratoire de Chimie Bio-Organique UA 488 CNRS University des Sciences et Techniques du Languedoc, Place E. Bataillon 34060 Montpellier CWex 1, France
Received March 16, 1989. Revised June 7, 1989. Accepted June 7, 1989.
ps- and aps-
anomeric oligodeoxyribonucleotides were designed to recognize in parallel (ps) or antiparallel (aps) orientation two different sites of a 1000 base-long rnRNA. Northern blots experiments indicate that only ps-
-oligonucleotides were able to hybridize to the mRNA target. Furthermore, only ps-a-oligonucleotides were able, in a sequence specific way, to protect the mRNA target against RNase H mediated hydrolysis or to inactivate the priming capacity of ß-oligodeoxynucleotide probes in reverse transcription. Formation of parallel-stranded mRNA
-oligonucleotide miniduplexes which prevents hybridization of ß-oligonucleotide probes is the most likely mechanism accounting for these results. Use of a-oligonucleotides as potential gene control agents is discussed.