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Nucleic Acids Research, 1989, Vol. 17, No. 23 10015-10034
© 1989


MOLECULAR BIOLOGY

Binding sites of HeLa cell nuclear proteins on the upstream region of adenovirus type 5 E1A gene

Koichi Yoshida, Mitsuo Narita and Kei Fujinaga

Department of Molecular Biology, Cancer Research Institute, Sapporo Medical College S-1, W-17, Chuo-ku, Sapporo 060, Japan

Received July 17, 1989. Revised October 27, 1989. Accepted October 27, 1989.

Twenty one binding sites of HeLa cell nuclear proteins were identified on the upstream region of adenovirus type 5 E1A gene using DNase I footprint assay. The proximal promoter region contained five binding sites that overlapped the cap site, TATA box, TATA-like sequence, CCAAT box, and –100 region relative to the E1A cap site(+1). The +190 region was a potential site for octamer-motif binding proteins, such as NFIII and OBP100. An upstream copy of the E1A enhancer element 1 was the site for a factor (E1A-F) with the binding specificity of XGGAYGT(X=A, C; Y=A, T). E1A-F factor also bound to three other sites, one of which coincided with the distal E1A enhancer element. The distal element also contained a potential site for ATF factor. The adenovirus minimal origin of DNA replication competed for DNA-protein complex formation on the CCAAT and TATA box region and the –190 region, suggesting that these regions interacted with a common or related factor.


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