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Nucleic Acids Research, 1990, Vol. 18, No. 6 1361-1367
© 1990


MOLECULAR BIOLOGY

An archaebacterial cell-free transcription system. The expression of tRNA genes from Methanococcus vannielii is mediated by a transcription factor

Gerhard Frey, Michael Thomm*, Berit Brüdigam, Harald Peter Gohl and Winfried Hausner

Lehrstuhl für Mikrobiologie, Universität Regensburg, Universitätsstr 31 D-8400 Regensburg, FRG

*To whom correspondence should be addressed

Received January 19, 1990. Accepted February 20, 1990.

Our understanding of the mechanism of RNA biosynthesis in archaebacteria is limited, due in part to the inability of purified RNA polymerases to transcribe purified genes accurately in vitro. In the present study, we show that cell extracts of Methanococcus vannielli and Methanococcus thermolithotrophicus purified by gradient centrifugation synthesize a distinct transcript from templates harboring a cloned homologous tRNAVal and tRNAArg gene. The in vitro transcripts initiate with GTP at the same sites as in Methanococcus cells. About 60% of the sequence of the in vitro RNA products was analyzed by dideoxyterminated primer extension and found to be Identical with that of the precursors of tRNAVal and tRNAArg This findings Indicate that this RNA polymerase fraction both initiates and terminates transcription faithfully in vitro.

After purification of a cell-free extract (S-100) of M. thermolithotrophicus by phosphocellulose chromatography, the endogenous RNA polymerase has lost its ability to transcribe the tRNAVal gene accurately. The activity directing specific expression of this template was reconstituted by the addition of a protein-fraction devoid of RNA polymerase activity. Thus, a transcription factor appears to be required for accurate cell-free expression of tRNA genes from M. vannlelii.


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