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Nucleic Acids Research, 1992, Vol. 20, No. 19 5053-5060
© 1992


GENOME STRUCTURE AND MAPPING

Nucleolin forms a specific complex with a fragment of the viral (minus) strand of minute virus of mice DNA

Saïd Barrijal1, Manoussos Manoussos2, Zhennan Gu1, Bernard L. Avalosse1, Pascale Belenguer3, Francois Amalric3 and Jean Rommelaere1,2,*

1Laboratory of Biophysics and Radiobiology, Department of Molecular Biology, Université Libre de Bruxelles B-1640 Rhode St Genèse, Belgium 2Molecular Oncology Unit CNRS URA 1160, Institut Pasteur de Lille, F-59019 Lille Cédex, France 3Laboratory of Biochemistry and Cellular Genetics CNRS CNRS, 31062 Toulouse Cédex, France

* To whom correspondence should be addressed

Received July 13, 1992. Revised August 10, 1992. Accepted August 10, 1992.

Nucleolin, a major nucleolar protein, forms a specific complex with the genome (a single-stranded DNA molecule of minus polarity) of parvovlrus MVMp in vitro. By means of South-western blotting experiments, we mapped the binding site to a 222-nucleotide motif within the non-structural transcription unit, referred to as NUBE (nucleolln-blnding element). The specificity of the interaction was confirmed by competitive gel retardation assays. DNasel and nuclease S1 probing showed that NUBE folds into a secondary structure, in agreement with a computer-assisted conformational prediction. The whole NUBE may be necessary for the interaction with nucleolin, as suggested by the failure of NUBE subfragments to bind the protein and by the nuclease footprinting experiments. The present work extends the previously reported ability of nucleolin to form a specific complex with ribosomal RNA, to a defined DNA substrate. Considering the tropism of MVMp DNA replication for host cell nucleoll, these data raise the possibility that nucleolin may contribute to the regulation of the parvoviral life-cycle.


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