Nucleic Acids Research, 1992, Vol. 20, No. 21 5805-5810
© 1992
MOLECULAR BIOLOGY |
An ultraviolet light-damaged DNA recognition protein absent in xeroderma pigmentosum group E cells binds selectively to pyrimidine (64) pyrimidone photoproducts
Division of Toxicology and Department of Chemistry, Whitaker College of Health Sciences and Technology, Massachusetts Institute of Technology Cambridge, MA 02139, USA
* To whom correspondence should be addressed
Received June 17, 1992. Revised October 7, 1992. Accepted October 7, 1992.
The binding specificity was defined of a human ultraviolet light-damaged DNA recognition protein (UV-DRP), the activity of which is absent in some xeroderma pigmentosum complementation group E cells. Our results suggest that cyclobutane pyrimidine dimers (CPDs) are not high affinity UV-DRP binding sitesa finding consistent with other reports on this protein (Hirschfeld et al)., (1990) Mol. Cell Biol., 10, 2041 2048). A major role for 64 photoproducts in UV-DRP binding was suggested in studies showing that irradiated oligonucleotides containing a T4C UV box sequence, which efficiently forms a TC 64 photoproduct, was a superior substrate for the UV-DRP when compared to a similar irradiated oligonucleotide having a T5 sequence. The latter sequence forms CPDs at a much higher frequency than 64 photoproducts. In a more direct approach, T4C-containing oligonucleotides complexed with the UV-DRP were separated from the unbound oligonucleotide fraction and the frequencies of 64 photoproducts in the two DNA populations were compared. The UV-DRP-bound fraction was highly enriched for the 64 lesion over the unbound fraction supporting the conclusion that 64 photoproducts are the principal binding cues for the UV-DRP.
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