Skip Navigation

This Article
Right arrow Print PDF (334K)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (46)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Brown, C. M.
Right arrow Articles by Tate, W. P.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Brown, C. M.
Right arrow Articles by Tate, W. P.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 1993, Vol. 21, No. 13 3119-3123
© 1993

Articles

The translational termination signal database

Chris M. Brown, Mark E. Dalphin, Peter A. Stockwell and Warren P. Tate

Department of Biochemistry and Centre for Gene Research, University of Otago Dunedin, New Zealand

The Translational Termination Database (TransTerm) consists of the Immediate context sequences around the natural termination codons from 45 organisms, and summary tables. The Influence of termination codon context on their effectiveness as stop signals has been widely documented. The SPECIES_TRI.DAT table shows trlnucteotlde stop codon usage In each organism and for comparison the occurrence of these sequences In the noncodlng region. The SPECIES_TETRA.DAT table contains is a similar table of tetranucleotlde stop signal usage. The database is available from EMBL.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 J. Bacteriol.Home page
U. Wegmann, M. O'Connell-Motherway, A. Zomer, G. Buist, C. Shearman, C. Canchaya, M. Ventura, A. Goesmann, M. J. Gasson, O. P. Kuipers, et al.
Complete Genome Sequence of the Prototype Lactic Acid Bacterium Lactococcus lactis subsp. cremoris MG1363
J. Bacteriol., April 15, 2007; 189(8): 3256 - 3270.
[Abstract] [Full Text] [PDF]

Home page
 Mol. Cell. Biol.Home page
K. M. Keeling, J. Salas-Marco, L. Z. Osherovich, and D. M. Bedwell
Tpa1p Is Part of an mRNP Complex That Influences Translation Termination, mRNA Deadenylation, and mRNA Turnover in Saccharomyces cerevisiae.
Mol. Cell. Biol., July 1, 2006; 26(14): 5237 - 5248.
[Abstract] [Full Text] [PDF]

Home page
 J. Immunol.Home page
Y. Watanabe, K. E. Magor, and P. Parham
Exon 5 Encoding the Transmembrane Region of HLA-A Contains a Transitional Region for the Induction of Nonsense-Mediated mRNA Decay
J. Immunol., December 15, 2001; 167(12): 6901 - 6911.
[Abstract] [Full Text] [PDF]

Home page
 Physiol. GenomicsHome page
Y. FUKUNISHI and Y. HAYASHIZAKI
Amino acid translation program for full-length cDNA sequences with frameshift errors
Physiol Genomics, March 8, 2001; 5(2): 81 - 87.
[Abstract] [Full Text] [PDF]

Home page
 Mol. Cell. Biol.Home page
M. Hemmings-Mieszczak, T. Hohn, and T. Preiss
Termination and Peptide Release at the Upstream Open Reading Frame Are Required for Downstream Translation on Synthetic Shunt-Competent mRNA Leaders
Mol. Cell. Biol., September 1, 2000; 20(17): 6212 - 6223.
[Abstract] [Full Text]

Home page
 Nucleic Acids ResHome page
G. H. Jacobs, P. A. Stockwell, M. J. Schrieber, W. P. Tate, and C. M. Brown
Transterm: a database of messenger RNA components and signals
Nucleic Acids Res., January 1, 2000; 28(1): 293 - 295.
[Abstract] [Full Text] [PDF]

Home page
 Protein Eng Des SelHome page
I. N. Berezovsky, G. T. Kilosanidze, V. G. Tumanyan, and L. L. Kisselev
Amino acid composition of protein termini are biased in different manners
Protein Eng. Des. Sel., January 1, 1999; 12(1): 23 - 30.
[Abstract] [Full Text] [PDF]

Home page
 Microbiol. Mol. Biol. Rev.Home page
J. E. G. McCarthy
Posttranscriptional Control of Gene Expression in Yeast
Microbiol. Mol. Biol. Rev., December 1, 1998; 62(4): 1492 - 1553.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
H. A. Meijer, W. J. A. G. Dictus, E. D. Keuning, and A. A. M. Thomas
Translational Control of the Xenopus laevis Connexin-41 5'-Untranslated Region by Three Upstream Open Reading Frames
J. Biol. Chem., September 29, 2000; 275(40): 30787 - 30793.
[Abstract] [Full Text] [PDF]


Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.