Skip Navigation

This Article
Right arrow Print PDF (2576K)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Hardison, R.
Right arrow Articles by Miller, W.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Hardison, R.
Right arrow Articles by Miller, W.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 1993, Vol. 21, No. 5 1265-1272
© 1993


MOLECULAR BIOLOGY

Comparative analysis of the locus control region of the rabbit ß-like globin gene cluster: HS3 increases transient expression of an embryonic {varepsilon}-globin gene

Ross Hardison, Jia Xu, John Jackson, James Mansberger, Olga Selifonova, Brent Grotch, Jessica Biesecker, Hania Petrykowska and Webb Miller1

Departments of Molecular and Cell Biology 206 Althouse Laboratory, The Pennsylvania State University, University Park, PA 16802, USA 1Computer Science, Center for Gene Regulation and Institute for Molecular Evolutionary Genetics 206 Althouse Laboratory, The Pennsylvania State University, University Park, PA 16802, USA

Received October 23, 1992. Revised January 26, 1993. Accepted January 26, 1993.

The rabbit homolog to the locus control region (LCR) of the human ß-like globln gene cluster was isolated, and long segments containing the DNase I hypersensitive sites (HS) were sequenced. The order and spacing of HS4, HS3, HS2 and HS1 are conserved between rabbit and human. Alignment of these sequences with their homologs from human, goat, and mouse shows that very long segments of DNA match between species, for over a thousand base pairs on either side of the previously identified functional cores, Indicating that some important functions are found outside the cores. The activity of rabbit HS2 and HS3 was tested by attaching each to a novel reporter gene constructed by inserting the luciferase coding region into the rabbit {varepsilon}-globln gene. In contrast to previous reports showing no effect of human or mouse HS3 on transient expression, both the rabbit HS2 and HS3 DNA fragments separately increased transient expression from the {varepsilon}-luciferase hybrid gene and expression from stably Integrated constructs in K562 erythroleukemia cells.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
BioinformaticsHome page
T. Sauer, E. Shelest, and E. Wingender
Evaluating phylogenetic footprinting for human-rodent comparisons
Bioinformatics, February 15, 2006; 22(4): 430 - 437.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
K. D. Johnson, J. E. Norton, and E. H. Bresnick
Requirements for utilization of CREB binding protein by hypersensitive site two of the {beta}-globin locus control region
Nucleic Acids Res., April 1, 2002; 30(7): 1522 - 1530.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
E. C. Forsberg, T. N. Zaboikina, W. K. Versaw, N. G. Ahn, and E. H. Bresnick
Enhancement of beta -Globin Locus Control Region-Mediated Transactivation by Mitogen-Activated Protein Kinases through Stochastic and Graded Mechanisms
Mol. Cell. Biol., August 1, 1999; 19(8): 5565 - 5575.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. T. Lam and E. H. Bresnick
Identity of the beta -Globin Locus Control Region Binding Protein HS2NF5 as the Mammalian Homolog of the Notch-regulated Transcription Factor Suppressor of Hairless
J. Biol. Chem., September 11, 1998; 273(37): 24223 - 24231.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
W. K. Versaw, V. Blank, N. M. Andrews, and E. H. Bresnick
Mitogen-activated protein kinases enhance long-range activation by the beta -globin locus control region
PNAS, July 21, 1998; 95(15): 8756 - 8760.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
E. H. Bresnick and L. Tze
Synergism between hypersensitive sites confers long-range gene activation by the beta -globin locus control region
PNAS, April 29, 1997; 94(9): 4566 - 4571.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. Elnitski, W. Miller, and R. Hardison
Conserved E Boxes Function as Part of the Enhancer in Hypersensitive Site 2of the beta -Globin Locus Control Region. ROLE OF BASIC HELIX-LOOP-HELIX PROTEINS
J. Biol. Chem., January 3, 1997; 272(1): 369 - 378.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. T. Lam and E. H. Bresnick
A Novel DNA-binding Protein, HS2NF5, Interacts with a Functionally Important Sequence of the Human beta -Globin Locus Control Region
J. Biol. Chem., December 13, 1996; 271(50): 32421 - 32429.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
J. D. Jackson, H. Petrykowska, S. Philipsen, W. Miller, and R. Hardison
Role of DNA Sequences Outside the Cores of DNase Hypersensitive Sites (HSs) in Functions of the beta-Globin Locus Control Region
J. Biol. Chem., May 17, 1996; 271(20): 11871 - 11878.
[Abstract] [Full Text] [PDF]


Home page
DevelopmentHome page
R Tewari, N Gillemans, A Harper, M Wijgerde, G Zafarana, D Drabek, F Grosveld, and S Philipsen
The human beta-globin locus control region confers an early embryonic erythroid-specific expression pattern to a basic promoter driving the bacterial lacZ gene
Development, January 12, 1996; 122(12): 3991 - 3999.
[Abstract] [PDF]


Home page
J. Biol. Chem.Home page
D. Donze, T. M. Townes, and J. J. Bieker
Role of Erythroid Kruppel-like Factor in Human [IMAGE]- to beta-Globin Gene Switching
J. Biol. Chem., January 27, 1995; 270(4): 1955 - 1959.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. Elnitski, J. Li, C. T. Noguchi, W. Miller, and R. Hardison
A Negative Cis-element Regulates the Level of Enhancement by Hypersensitive Site 2 of the beta -Globin Locus Control Region
J. Biol. Chem., February 23, 2001; 276(9): 6289 - 6298.
[Abstract] [Full Text] [PDF]



Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.