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Nucleic Acids Research, 1994, Vol. 22, No. 13 2604-2611
© 1994


RNA

Solid-phase synthesis of chelate-labelled oligonucleotides: application in triple-color ligase-mediated gene analysis

Marek Kwiatkowski*, Martina Samiotaki, Urpo Lamminmäki, Veli-Matti Mukkala1 and Ulf Landegren

The Beijer Laboratory, Department of Medical Genetics Box 589 BMC, S-75123 Uppsala, Sweden 1Department of Chemistry, University of Turku Finland

*To whom correspondence should bs addressed

Received March 15, 1994. Revised May 26, 1994. Accepted May 26, 1994.

Oligonucleotides labelled with detectable groups are essential tools in gene detection. We describe here the synthesis of pyrimidine deoxynucleotide-building blocks, modified at their C-5 position with a protected form of a strongly chelating agent. These reagents can be used to introduce multiple metal ions into oligodeoxynucleotides during standard oligonucleotide synthesis. The chelating functions form strongly fluorescent complexes with europium ions, characterized by a wide separation between the excitation and emission spectra. Moreover, the long decay time of the fluorescence permits sensitive timeresolved fluorescence measurements. The chelates also have the stability required to function in triple-color assays involving europium, samarium, and terbium ions. We demonstrate the application of these reagents for ligase-based gene analysis reactions.


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