Skip Navigation

This Article
Right arrow Print PDF (2734K)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (24260)
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Thompson, J. D.
Right arrow Articles by Gibson, T. J.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Thompson, J. D.
Right arrow Articles by Gibson, T. J.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 1994, Vol. 22, No. 22 4673-4680
© 1994


COMPUTATIONAL BIOLOGY

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Julie D. Thompson, Desmond G. Higgins+ and Toby J. Gibson*

European Molecular Biolgoy Laboratory Postfach 102209, Meyerhofstrasse 1, D-69012 Heidelberg, Germany

*To whom correspondence should be addressed

Received July 12, 1994. Revised September 23, 1994. Accepted September 23, 1994.

The sensitivity of the commonly used progressive multiple sequence alignment method has been greatly improved for the alignment of divergent protein sequences. Firstly, individual weights are assigned to each sequence in a partial alignment in order to downweight near-duplicate sequences and up-weight the most divergent ones. Secondly, amino acid substitution matrices are varied at different alignment stages according to the divergence of the sequences to be aligned. Thirdly, residue-specific gap penalties and locally reduced gap penalties in hydrophilic regions encourage new gaps in potential loop regions rather than regular secondary structure. Fourthly, positions in early alignments where gaps have been opened receive locally reduced gap penalties to encourage the opening up of new gaps at these positions. These modifications are incorporated into a new program, CLUSTAL W which is freely available.


+Present address: European Bioinformatics Institute, Hinxton Hall, Hinxton, Cambridge CB10 IRQ. UK


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
J. Gen. Virol.Home page
Y. Yogo, S. Zhong, Y. Xu, M. Zhu, Y. Chao, C. Sugimoto, H. Ikegaya, A. Shibuya, and T. Kitamura
Conserved archetypal configuration of the transcriptional control region during the course of BK polyomavirus evolution
J. Gen. Virol., August 1, 2008; 89(8): 1849 - 1856.
[Abstract] [Full Text] [PDF]


Home page
J. Gen. Virol.Home page
K. Germain, B. Croise, and S. Valas
Field evaluation of a gag/env heteroduplex mobility assay for genetic subtyping of small-ruminant lentiviruses
J. Gen. Virol., August 1, 2008; 89(8): 2020 - 2028.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
M. S. Marengo and D. A. Wassarman
A DNA damage signal activates and derepresses exon inclusion in Drosophila TAF1 alternative splicing
RNA, August 1, 2008; 14(8): 1681 - 1695.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
H. Li, L. V. Thomassen, A. Majid, B. J. McMahon, D. Bruden, S. McArdle, N. Bano, M. Chung, R. L. Carithers, J. D. Perkins, et al.
Investigation of Putative Multisubtype Hepatitis C Virus Infections In Vivo by Heteroduplex Mobility Analysis of Core/Envelope Subgenomes
J. Virol., August 1, 2008; 82(15): 7524 - 7532.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
M. J. H. Moonen, N. M. Kamerbeek, A. H. Westphal, S. A. Boeren, D. B. Janssen, M. W. Fraaije, and W. J. H. van Berkel
Elucidation of the 4-Hydroxyacetophenone Catabolic Pathway in Pseudomonas fluorescens ACB
J. Bacteriol., August 1, 2008; 190(15): 5190 - 5198.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
M. J. H. Moonen, S. A. Synowsky, W. A. M. van den Berg, A. H. Westphal, A. J. R. Heck, R. H. H. van den Heuvel, M. W. Fraaije, and W. J. H. van Berkel
Hydroquinone Dioxygenase from Pseudomonas fluorescens ACB: a Novel Member of the Family of Nonheme-Iron(II)-Dependent Dioxygenases
J. Bacteriol., August 1, 2008; 190(15): 5199 - 5209.
[Abstract] [Full Text] [PDF]


Home page
GlycobiologyHome page
M. Lommel, T. Willer, and S. Strahl
POMT2, a key enzyme in Walker-Warburg syndrome: somatic sPOMT2, but not testis-specific tPOMT2, is crucial for mannosyltransferase activity in vivo
Glycobiology, August 1, 2008; 18(8): 615 - 625.
[Abstract] [Full Text] [PDF]


Home page
GlycobiologyHome page
N. Deshpande, M. R Wilkins, N. Packer, and H. Nevalainen
Protein glycosylation pathways in filamentous fungi
Glycobiology, August 1, 2008; 18(8): 626 - 637.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
N. Oezguen, S. Kumar, A. Hindupur, W. Braun, B. K. Muralidhara, and J. R. Halpert
Identification and Analysis of Conserved Sequence Motifs in Cytochrome P450 Family 2: FUNCTIONAL AND STRUCTURAL ROLE OF A MOTIF 187RFDYKD192 IN CYP2B ENZYMES
J. Biol. Chem., August 1, 2008; 283(31): 21808 - 21816.
[Abstract] [Full Text] [PDF]


Home page
ANN BOT (LOND)Home page
M. Pre, V. Caillet, J. Sobilo, and J. McCarthy
Characterization and Expression Analysis of Genes Directing Galactomannan Synthesis in Coffee
Ann. Bot., August 1, 2008; 102(2): 207 - 220.
[Abstract] [Full Text] [PDF]


Home page
J. Cell Sci.Home page
M. A. M. Reijns, R. D. Alexander, M. P. Spiller, and J. D. Beggs
A role for Q/N-rich aggregation-prone regions in P-body localization
J. Cell Sci., August 1, 2008; 121(15): 2463 - 2472.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
B. G. Hall
How Well Does the HoT Score Reflect Sequence Alignment Accuracy?
Mol. Biol. Evol., August 1, 2008; 25(8): 1576 - 1580.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
Y. Zhao and R. J. Epstein
Programmed Genetic Instability: A Tumor-Permissive Mechanism for Maintaining the Evolvability of Higher Species through Methylation-Dependent Mutation of DNA Repair Genes in the Male Germ Line
Mol. Biol. Evol., August 1, 2008; 25(8): 1737 - 1749.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
T. Dagan, Y. Artzy-Randrup, and W. Martin
Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
PNAS, July 22, 2008; 105(29): 10039 - 10044.
[Abstract] [Full Text] [PDF]


Home page
J Exp BotHome page
A. Rival, E. Jaligot, T. Beule, and E. J. Finnegan
Isolation and expression analysis of genes encoding MET, CMT, and DRM methyltransferases in oil palm (Elaeis guineensis Jacq.) in relation to the 'mantled' somaclonal variation
J. Exp. Bot., July 17, 2008; (2008) ern178v1.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
R. Zhu, Y.-B. Zhang, Q.-Y. Zhang, and J.-F. Gui
Functional Domains and the Antiviral Effect of the Double-Stranded RNA-Dependent Protein Kinase PKR from Paralichthys olivaceus
J. Virol., July 15, 2008; 82(14): 6889 - 6901.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
S. W. Singer, C. S. Chan, A. Zemla, N. C. VerBerkmoes, M. Hwang, R. L. Hettich, J. F. Banfield, and M. P. Thelen
Characterization of Cytochrome 579, an Unusual Cytochrome Isolated from an Iron-Oxidizing Microbial Community
Appl. Envir. Microbiol., July 15, 2008; 74(14): 4454 - 4462.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
K. Ueda, Y. Tagami, Y. Kamihara, H. Shiratori, H. Takano, and T. Beppu
Isolation of Bacteria Whose Growth Is Dependent on High Levels of CO2 and Implications of Their Potential Diversity
Appl. Envir. Microbiol., July 15, 2008; 74(14): 4535 - 4538.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
L. Martinez-Aguilar, R. Diaz, J. J. Pena-Cabriales, P. Estrada-de los Santos, M. F. Dunn, and J. Caballero-Mellado
Multichromosomal Genome Structure and Confirmation of Diazotrophy in Novel Plant-Associated Burkholderia Species
Appl. Envir. Microbiol., July 15, 2008; 74(14): 4574 - 4579.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
M. Quemeneur, A. Heinrich-Salmeron, D. Muller, D. Lievremont, M. Jauzein, P. N. Bertin, F. Garrido, and C. Joulian
Diversity Surveys and Evolutionary Relationships of aoxB Genes in Aerobic Arsenite-Oxidizing Bacteria
Appl. Envir. Microbiol., July 15, 2008; 74(14): 4567 - 4573.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
I. Roca, E. Torrents, M. Sahlin, I. Gibert, and B.-M. Sjoberg
NrdI Essentiality for Class Ib Ribonucleotide Reduction in Streptococcus pyogenes
J. Bacteriol., July 15, 2008; 190(14): 4849 - 4858.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
W. Gao and A. J. Francis
Reduction of Uranium(VI) to Uranium(IV) by Clostridia
Appl. Envir. Microbiol., July 15, 2008; 74(14): 4580 - 4584.
[Abstract] [Full Text] [PDF]


Home page
J. Immunol.Home page
A. Ferrer-Admetlla, E. Bosch, M. Sikora, T. Marques-Bonet, A. Ramirez-Soriano, A. Muntasell, A. Navarro, R. Lazarus, F. Calafell, J. Bertranpetit, et al.
Balancing Selection Is the Main Force Shaping the Evolution of Innate Immunity Genes
J. Immunol., July 15, 2008; 181(2): 1315 - 1322.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
D. S. Campo, Z. Dimitrova, R. J. Mitchell, J. Lara, and Y. Khudyakov
Coordinated evolution of the hepatitis C virus
PNAS, July 15, 2008; 105(28): 9685 - 9690.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
R. Das, M. T. Mazhab-Jafari, S. Chowdhury, S. SilDas, R. Selvaratnam, and G. Melacini
Entropy-driven cAMP-dependent Allosteric Control of Inhibitory Interactions in Exchange Proteins Directly Activated by cAMP
J. Biol. Chem., July 11, 2008; 283(28): 19691 - 19703.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
M. J. Sanderson
Phylogenetic Signal in the Eukaryotic Tree of Life
Science, July 4, 2008; 321(5885): 121 - 123.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
G. Verdone, R. Doliana, A. Corazza, S. A. Colebrooke, P. Spessotto, S. Bot, F. Bucciotti, A. Capuano, A. Silvestri, P. Viglino, et al.
The Solution Structure of EMILIN1 Globular C1q Domain Reveals a Disordered Insertion Necessary for Interaction with the {alpha}4{beta}1 Integrin
J. Biol. Chem., July 4, 2008; 283(27): 18947 - 18956.
[Abstract] [Full Text] [PDF]


Home page
J. Neurosci.Home page
M. Moroni, R. Vijayan, A. Carbone, R. Zwart, P. C. Biggin, and I. Bermudez
Non-Agonist-Binding Subunit Interfaces Confer Distinct Functional Signatures to the Alternate Stoichiometries of the {alpha}4{beta}2 Nicotinic Receptor: An {alpha}4-{alpha}4 Interface Is Required for Zn2+ Potentiation
J. Neurosci., July 2, 2008; 28(27): 6884 - 6894.
[Abstract] [Full Text] [PDF]


Home page
JNCI J Natl Cancer InstHome page
A. E. Snook, B. J. Stafford, P. Li, G. Tan, L. Huang, R. Birbe, S. Schulz, M. J. Schnell, M. Thakur, J. L. Rothstein, et al.
Guanylyl Cyclase C-Induced Immunotherapeutic Responses Opposing Tumor Metastases Without Autoimmunity
J Natl Cancer Inst, July 2, 2008; 100(13): 950 - 961.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
C. Thawai, S. Tanasupawat, and T. Kudo
Micromonospora pattaloongensis sp. nov., isolated from a Thai mangrove forest
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1516 - 1521.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
H.-Y. Weon, C.-M. Lee, S.-B. Hong, B.-Y. Kim, S.-H. Yoo, S.-W. Kwon, and S.-J. Go
Kaistia soli sp. nov., isolated from a wetland in Korea
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1522 - 1524.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
H.-Y. Weon, S.-H. Yoo, S.-B. Hong, S.-W. Kwon, E. Stackebrandt, S.-J. Go, and B.-S. Koo
Polaromonas jejuensis sp. nov., isolated from soil in Korea
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1525 - 1528.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
A. Kageyama, A. Matsumoto, S. Omura, and Y. Takahashi
Humibacillus xanthopallidus gen. nov., sp. nov.
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1547 - 1551.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
H. Matsuyama, H. Katoh, T. Ohkushi, A. Satoh, K. Kawahara, and I. Yumoto
Sphingobacterium kitahiroshimense sp. nov., isolated from soil
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1576 - 1579.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
D. Yu. Sorokin, T. P. Tourova, G. Muyzer, and G. J. Kuenen
Thiohalospira halophila gen. nov., sp. nov. and Thiohalospira alkaliphila sp. nov., novel obligately chemolithoautotrophic, halophilic, sulfur-oxidizing gammaproteobacteria from hypersaline habitats
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1685 - 1692.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
T. X. Han, E. T. Wang, L. J. Wu, W. F. Chen, J. G. Gu, C. T. Gu, C. F. Tian, and W. X. Chen
Rhizobium multihospitium sp. nov., isolated from multiple legume species native of Xinjiang, China
Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1693 - 1699.
[Abstract] [Full Text] [PDF]


Home page
jvdiHome page
L. Mia Kim, D. L. Suarez, and C. L. Afonso
Detection of a broad range of class I and II Newcastle disease viruses using a multiplex real-time reverse transcription polymerase chain reaction assay
J Vet Diagn Invest, July 1, 2008; 20(4): 414 - 425.
[Abstract] [Full Text] [PDF]


Home page
MicrobiologyHome page
H. Dang, X. Zhang, J. Sun, T. Li, Z. Zhang, and G. Yang
Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea
Microbiology, July 1, 2008; 154(7): 2084 - 2095.
[Abstract] [Full Text] [PDF]


Home page
MicrobiologyHome page
N. Thirunavukkarasu, M. N. Mishra, S. Spaepen, J. Vanderleyden, C. A. Gross, and A. K. Tripathi
An extra-cytoplasmic function sigma factor and anti-sigma factor control carotenoid biosynthesis in Azospirillum brasilense
Microbiology, July 1, 2008; 154(7): 2096 - 2105.
[Abstract] [Full Text] [PDF]


Home page
Lab AnimHome page
A. Bleich, P. Kirsch, H. Sahly, J. Fahey, A. Smoczek, H.-J. Hedrich, and J. P Sundberg
Klebsiella oxytoca: opportunistic infections in laboratory rodents
Lab Anim, July 1, 2008; 42(3): 369 - 375.
[Abstract] [Full Text] [PDF]


Home page
Brief BioinformHome page
K. Katoh and H. Toh
Recent developments in the MAFFT multiple sequence alignment program
Brief Bioinform, July 1, 2008; 9(4): 286 - 298.
[Abstract] [Full Text] [PDF]


Home page
Am. J. Bot.Home page
M. R. Duvall, J. W. Robinson, J. G. Mattson, and A. Moore
Phylogenetic analyses of two mitochondrial metabolic genes sampled in parallel from angiosperms find fundamental interlocus incongruence
Am. J. Botany, July 1, 2008; 95(7): 871 - 884.
[Abstract] [Full Text] [PDF]


Home page
Infect. Immun.Home page
A. Qin, D. W. Scott, and B. J. Mann
Francisella tularensis subsp. tularensis Schu S4 Disulfide Bond Formation Protein B, but Not an RND-Type Efflux Pump, Is Required for Virulence
Infect. Immun., July 1, 2008; 76(7): 3086 - 3092.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
L. C. M. Antunes, R. B. R. Ferreira, C. P. Lostroh, and E. P. Greenberg
A Mutational Analysis Defines Vibrio fischeri LuxR Binding Sites
J. Bacteriol., July 1, 2008; 190(13): 4392 - 4397.
[Abstract] [Full Text] [PDF]


Home page
IOVSHome page
S. G. Remington, J. M. Crow, and J. D. Nelson
Secretoglobins: Lacrimal Gland-Specific Rabbit Lipophilin mRNAs
Invest. Ophthalmol. Vis. Sci., July 1, 2008; 49(7): 2856 - 2862.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
P. Gayral, J.-C. Noa-Carrazana, M. Lescot, F. Lheureux, B. E. L. Lockhart, T. Matsumoto, P. Piffanelli, and M.-L. Iskra-Caruana
A Single Banana Streak Virus Integration Event in the Banana Genome as the Origin of Infectious Endogenous Pararetrovirus
J. Virol., July 1, 2008; 82(13): 6697 - 6710.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
L. Feng, B. Liu, Y. Liu, Y. A. Ratiner, B. Hu, D. Li, X. Zong, W. Xiong, and L. Wang
A Genomic Islet Mediates Flagellar Phase Variation in Escherichia coli Strains Carrying the Flagellin-Specifying Locus flk
J. Bacteriol., July 1, 2008; 190(13): 4470 - 4477.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
P. Munoz de Rueda, J. Casado, R. Paton, D. Quintero, A. Palacios, A. Gila, R. Quiles, J. Leon, A. Ruiz-Extremera, and J. Salmeron
Mutations in E2-PePHD, NS5A-PKRBD, NS5A-ISDR, and NS5A-V3 of Hepatitis C Virus Genotype 1 and Their Relationships to Pegylated Interferon-Ribavirin Treatment Responses
J. Virol., July 1, 2008; 82(13): 6644 - 6653.
[Abstract] [Full Text] [PDF]


Home page
J. Virol.Home page
V. G. Preston, J. Murray, C. M. Preston, I. M. McDougall, and N. D. Stow
The UL25 Gene Product of Herpes Simplex Virus Type 1 Is Involved in Uncoating of the Viral Genome
J. Virol., July 1, 2008; 82(13): 6654 - 6666.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
C. T. C. Hodson, A. Lewin, L. Hederstedt, and N. E. Le Brun
The Active-Site Cysteinyls and Hydrophobic Cavity Residues of ResA Are Important for Cytochrome c Maturation in Bacillus subtilis
J. Bacteriol., July 1, 2008; 190(13): 4697 - 4705.
[Abstract] [Full Text] [PDF]


Home page
Appl. Environ. Microbiol.Home page
Y. Shirai, Y. Tomaru, Y. Takao, H. Suzuki, T. Nagumo, and K. Nagasaki
Isolation and Characterization of a Single-Stranded RNA Virus Infecting the Marine Planktonic Diatom Chaetoceros tenuissimus Meunier
Appl. Envir. Microbiol., July 1, 2008; 74(13): 4022 - 4027.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
E. Sisakova, L. K. Stanley, M. Weiserova, and M. D. Szczelkun
A RecB-family nuclease motif in the Type I restriction endonuclease EcoR124I
Nucleic Acids Res., July 1, 2008; 36(12): 3939 - 3949.
[Abstract] [Full Text] [PDF]


Home page
The Plant GenomeHome page
M. Yamasaki, S. G. Schroeder, H. Sanchez-Villeda, B. S. Gaut, and M. D. McMullen
Empirical Analysis of Selection Screens for Domestication and Improvement Loci in Maize by Extended DNA Sequencing
The Plant Genome, July 1, 2008; 1(1): 33 - 43.
[Abstract] [Full Text] [PDF]


Home page
ANN BOT (LOND)Home page
A. T. Ku, Y.-S. Huang, Y.-S. Wang, D. Ma, and K.-W. Yeh
IbMADS1 (Ipomoea batatas MADS-box 1 gene) is Involved in Tuberous Root Initiation in Sweet Potato (Ipomoea batatas)
Ann. Bot., July 1, 2008; 102(1): 57 - 67.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
Y. Ishida and W. S. Leal
Chiral discrimination of the Japanese beetle sex pheromone and a behavioral antagonist by a pheromone-degrading enzyme
PNAS, July 1, 2008; 105(26): 9076 - 9080.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
K. Asai, H. Kiryu, M. Hamada, Y. Tabei, K. Sato, H. Matsui, Y. Sakakibara, G. Terai, and T. Mituyama
Software.ncrna.org: web servers for analyses of RNA sequences
Nucleic Acids Res., July 1, 2008; 36(suppl_2): W75 - W78.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
E. Torarinsson and S. Lindgreen
WAR: Webserver for aligning structural RNAs
Nucleic Acids Res., July 1, 2008; 36(suppl_2): W79 - W84.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
T.-H. Chang, J.-T. Horng, and H.-D. Huang
RNALogo: a new approach to display structural RNA alignment
Nucleic Acids Res., July 1, 2008; 36(suppl_2): W91 - W96.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
Y.-F. Chang, Y.-L. Huang, and C. L. Lu
SARSA: a web tool for structural alignment of RNA using a structural alphabet
Nucleic Acids Res., July 1, 2008; 36(suppl_2): W19 - W24.
[Abstract] [Full Text] [PDF]


Home page