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Nucleic Acids Research, 1995, Vol. 23, No. 1 58-63
© 1995


MOLECULAR BIOLOGY

The actinophage RP3 DNA integrates site-specifically into the putative tRNAArg(AGG) gene of Streptomyces rimosus

Karin Gabriel, Holger Schmid, Ute Schmidt and Helmut Rausch*

Institut für Genetik und Mikrobiologie der Universitat München Maria-Ward-Strasse 1A, 80638 München, Germany

*To whom correspondence should be addressed

Received October 10, 1994. Revised November 29, 1994. Accepted November 29, 1994.

The temperate actinophage RP3 integrates site–specifically into the chromosome of Streptomyces rimosus R6-554. The phage attachment site attP and the hybrid attachment sites of the integrated prophage—attL and attR—were cloned and sequenced. The 54nt core sequence, common to all RP3 related attachment sites, comprises the 3' terminal end of a putative tRNAArg(AGG) gene. AttB bears the complete tRNA gene which is restored in attL after integration. A 7.5kb HindIll fragment, bearing attP, was used to construct an integrative plasmid to simulate the integration process in vivo and to localize the phage genes necessary for site specific integration. The mt and xis genes were sequenced and compared to other recombination genes.


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