Nucleic Acids Research, 1995, Vol. 23, No. 5 785-787
© 1995
ENZYMOLOGY |
A motif conserved among the type I restriction-modification enzymes and antirestriction proteins: a possible basis for mechanism of action of plasmid-encoded antirestriction functions
Department of Genetic Engineering, Cardiology Research Center Moscow 121552, Russia
*To whom correspondence should be addressed
Received November 14, 1994. Revised January 19, 1995. Accepted January 19, 1995.
Antirestriction proteins Ard encoded by some self-transmissible plasmids specifically inhibit restriction by members ofall three families of type I restriction-modification (R-M) systems in E.coli. Recently, we have identified the amino acid region, antirestriction domain, that is conserved within different plasmid and phage T7-encoded antirestriction proteins and may be involved in interaction with the type I R-M systems. In this paper we demonstrate that this amino acid sequence shares considerable similarity with a well-known conserved sequence (the Argos repeat) found in the DNA sequence specificity (S) polypeptides of type I systems. We suggest that the presence of these similar motifs in restriction and antirestriction proteins may give a structural basis for their interaction and that the antirestriction action of Ard proteins may be a result of the competition between the antirestriction domains of Ard proteins and the similar conserved domains of the S subunits that are believed to play a role In the subunit assembly of type I R-M systems.
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