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Nucleic Acids Research, Vol 24, Issue 13 2519-2524, Copyright © 1996 by Oxford University Press


ARTICLES

A new efficient gene disruption cassette for repeated use in budding yeast

U Guldener, S Heck, T Fielder, J Beinhauer and JH Hegemann
Institut fur Mikrobiologie und Molekularbiologie, Justus-Liebig- Universitat Giessen, Giessen, Germany.

The dominant kanr marker gene plays an important role in gene disruption experiments in budding yeast, as this marker can be used in a variety of yeast strains lacking the conventional yeast markers. We have developed a loxP-kanMX-loxP gene disruption cassette, which combines the advantages of the heterologous kanr marker with those from the Cre-lox P recombination system. This disruption cassette integrates with high efficiency via homologous integration at the correct genomic locus (routinely 70%). Upon expression of the Cre recombinase the kanMX module is excised by an efficient recombination between the loxP sites, leaving behind a single loxP site at the chromosomal locus. This system allows repeated use of the kanr marker gene and will be of great advantage for the functional analysis of gene families.
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Water channels are important for osmotic adjustments of yeast cells at low temperature.
Microbiology, May 1, 2006; 152(Pt 5): 1515 - 1521.
[Abstract] [Full Text] [PDF]


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Mol. Cell. Biol.Home page
G. Wang and R. J. Deschenes
Plasma Membrane Localization of Ras Requires Class C Vps Proteins and Functional Mitochondria in Saccharomyces cerevisiae
Mol. Cell. Biol., April 15, 2006; 26(8): 3243 - 3255.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
S. Padilla-Lopez and D. A. Pearce
Saccharomyces cerevisiae Lacking Btn1p Modulate Vacuolar ATPase Activity to Regulate pH Imbalance in the Vacuole
J. Biol. Chem., April 14, 2006; 281(15): 10273 - 10280.
[Abstract] [Full Text] [PDF]


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GeneticsHome page
V. Voronkova, N. Kacherovsky, C. Tachibana, D. Yu, and E. T. Young
Snf1-Dependent and Snf1-Independent Pathways of Constitutive ADH2 Expression in Saccharomyces cerevisiae
Genetics, April 1, 2006; 172(4): 2123 - 2138.
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GeneticsHome page
H. Singh, A. M. Erkine, S. B. Kremer, H. M. Duttweiler, D. A. Davis, J. Iqbal, R. R. Gross, and D. S. Gross
A Functional Module of Yeast Mediator That Governs the Dynamic Range of Heat-Shock Gene Expression
Genetics, April 1, 2006; 172(4): 2169 - 2184.
[Abstract] [Full Text] [PDF]


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Mol. Biol. CellHome page
W. Li, L. Sun, Q. Liang, J. Wang, W. Mo, and B. Zhou
Yeast AMID Homologue Ndi1p Displays Respiration-restricted Apoptotic Activity and Is Involved in Chronological Aging
Mol. Biol. Cell, April 1, 2006; 17(4): 1802 - 1811.
[Abstract] [Full Text] [PDF]


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J. D. Irvin and B. F. Pugh
Genome-wide Transcriptional Dependence on TAF1 Functional Domains
J. Biol. Chem., March 10, 2006; 281(10): 6404 - 6412.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
P. Ternes, P. Sperling, S. Albrecht, S. Franke, J. M. Cregg, D. Warnecke, and E. Heinz
Identification of Fungal Sphingolipid C9-methyltransferases by Phylogenetic Profiling
J. Biol. Chem., March 3, 2006; 281(9): 5582 - 5592.
[Abstract] [Full Text] [PDF]


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RNAHome page
A. ZHELKOVSKY, Y. TACAHASHI, T. NASSER, X. HE, U. STERZER, T. H. JENSEN, H. DOMDEY, and C. MOORE
The role of the Brr5/Ysh1 C-terminal domain and its homolog Syc1 in mRNA 3'-end processing in Saccharomyces cerevisiae
RNA, March 1, 2006; 12(3): 435 - 445.
[Abstract] [Full Text] [PDF]


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Nucleic Acids ResHome page
F. J. van Werven and H. Th. M. Timmers
The use of biotin tagging in Saccharomyces cerevisiae improves the sensitivity of chromatin immunoprecipitation
Nucleic Acids Res., February 25, 2006; 34(4): e33 - e33.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
S. M. G. Saerens, K. J. Verstrepen, S. D. M. Van Laere, A. R. D. Voet, P. Van Dijck, F. R. Delvaux, and J. M. Thevelein
The Saccharomyces cerevisiae EHT1 and EEB1 Genes Encode Novel Enzymes with Medium-chain Fatty Acid Ethyl Ester Synthesis and Hydrolysis Capacity
J. Biol. Chem., February 17, 2006; 281(7): 4446 - 4456.
[Abstract] [Full Text] [PDF]


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J. Cell Sci.Home page
Z. Hu, B. Potthoff, C. P. Hollenberg, and M. Ramezani-Rad
Mdy2, a ubiquitin-like (UBL)-domain protein, is required for efficient mating in Saccharomyces cerevisiae
J. Cell Sci., January 15, 2006; 119(2): 326 - 338.
[Abstract] [Full Text] [PDF]


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Appl. Environ. Microbiol.Home page
Y.-S. Jin, H. Alper, Y.-T. Yang, and G. Stephanopoulos
Improvement of Xylose Uptake and Ethanol Production in Recombinant Saccharomyces cerevisiae through an Inverse Metabolic Engineering Approach
Appl. Envir. Microbiol., December 1, 2005; 71(12): 8249 - 8256.
[Abstract] [Full Text] [PDF]


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Mol. Cell. Biol.Home page
S. Lebaron, C. Froment, M. Fromont-Racine, J.-C. Rain, B. Monsarrat, M. Caizergues-Ferrer, and Y. Henry
The Splicing ATPase Prp43p Is a Component of Multiple Preribosomal Particles
Mol. Cell. Biol., November 1, 2005; 25(21): 9269 - 9282.
[Abstract] [Full Text] [PDF]


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Mol. Cell. Biol.Home page
J. Zhao, J. Herrera-Diaz, and D. S. Gross
Domain-Wide Displacement of Histones by Activated Heat Shock Factor Occurs Independently of Swi/Snf and Is Not Correlated with RNA Polymerase II Density
Mol. Cell. Biol., October 15, 2005; 25(20): 8985 - 8999.
[Abstract] [Full Text] [PDF]


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GeneticsHome page
K. Melcher
Mutational Hypersensitivity of a Gene Regulatory Protein: Saccharomyces cerevisiae Gal80p
Genetics, October 1, 2005; 171(2): 469 - 476.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
K. Meiling-Wesse, U. D. Epple, R. Krick, H. Barth, A. Appelles, C. Voss, E.-L. Eskelinen, and M. Thumm
Trs85 (Gsg1), a Component of the TRAPP Complexes, Is Required for the Organization of the Preautophagosomal Structure during Selective Autophagy via the Cvt Pathway
J. Biol. Chem., September 30, 2005; 280(39): 33669 - 33678.
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JCBHome page
J. E. Smotrys, M. J. Schoenfish, M. A. Stutz, and M. E. Linder
The vacuolar DHHC-CRD protein Pfa3p is a protein acyltransferase for Vac8p
J. Cell Biol., September 26, 2005; 170(7): 1091 - 1099.
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MutagenesisHome page
L. Walsh, P.W. Hastwell, P.O. Keenan, A.W. Knight, N. Billinton, and R.M. Walmsley
Genetic modification and variations in solvent increase the sensitivity of the yeast RAD54-GFP genotoxicity assay
Mutagenesis, September 1, 2005; 20(5): 317 - 327.
[Abstract] [Full Text] [PDF]


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Mol. Biol. CellHome page
L. Kozubowski, J. R. Larson, and K. Tatchell
Role of the Septin Ring in the Asymmetric Localization of Proteins at the Mother-Bud Neck in Saccharomyces cerevisiae
Mol. Biol. Cell, August 1, 2005; 16(8): 3455 - 3466.
[Abstract] [Full Text] [PDF]


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Mol. Biol. CellHome page
L. K. Palmer, J. L. Shoemaker, B. A. Baptiste, D. Wolfe, and R. L. Keil
Inhibition of Translation Initiation by Volatile Anesthetics Involves Nutrient-sensitive GCN-independent and -dependent Processes in Yeast
Mol. Biol. Cell, August 1, 2005; 16(8): 3727 - 3739.
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Eukaryot CellHome page
S. Krappmann, O. Bayram, and G. H. Braus
Deletion and Allelic Exchange of the Aspergillus fumigatus veA Locus via a Novel Recyclable Marker Module
Eukaryot. Cell, July 1, 2005; 4(7): 1298 - 1307.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
N. Puri, J. Lai-Zhang, S. Meier, and D. M. Mueller
Expression of Bovine F1-ATPase with Functional Complementation in Yeast Saccharomyces cerevisiae
J. Biol. Chem., June 10, 2005; 280(23): 22418 - 22424.
[Abstract] [Full Text] [PDF]


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Mol. Cell. Biol.Home page
J. R. Mullen, F. S. Nallaseth, Y. Q. Lan, C. E. Slagle, and S. J. Brill
Yeast Rmi1/Nce4 Controls Genome Stability as a Subunit of the Sgs1-Top3 Complex
Mol. Cell. Biol., June 1, 2005; 25(11): 4476 - 4487.
[Abstract] [Full Text] [PDF]


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Mol. Cell. Biol.Home page
C. Olivier, G. Poirier, P. Gendron, A. Boisgontier, F. Major, and P. Chartrand
Identification of a Conserved RNA Motif Essential for She2p Recognition and mRNA Localization to the Yeast Bud
Mol. Cell. Biol., June 1, 2005; 25(11): 4752 - 4766.
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Eukaryot CellHome page
P. Poulsen, B. Wu, R. F. Gaber, and M. C. Kielland-Brandt
Constitutive Signal Transduction by Mutant Ssy5p and Ptr3p Components of the SPS Amino Acid Sensor System in Saccharomyces cerevisiae
Eukaryot. Cell, June 1, 2005; 4(6): 1116 - 1124.
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Genome ResHome page
M. DeVit, P. J. Cullen, M. Branson, G. F. Sprague Jr., and S. Fields
Forcing interactions as a genetic screen to identify proteins that exert a defined activity
Genome Res., April 1, 2005; 15(4): 560 - 565.
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GeneticsHome page
V. Pilauri, M. Bewley, C. Diep, and J. Hopper
Gal80 Dimerization and the Yeast GAL Gene Switch
Genetics, April 1, 2005; 169(4): 1903 - 1914.
[Abstract] [Full Text] [PDF]



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