Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (504K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (57)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Benyajati, C.
Right arrow Articles by Elgin, S.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Benyajati, C.
Right arrow Articles by Elgin, S.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, Vol 25, Issue 16 3345-3353, Copyright © 1997 by Oxford University Press


ARTICLES

Multiple isoforms of GAGA factor, a critical component of chromatin structure

C Benyajati, L Mueller, N Xu, M Pappano, J Gao, M Mosammaparast, D Conklin, H Granok, C Craig and S Elgin
Department of Biology, University of Rochester, Rochester, NY 14627, USA. tip@cb.biology.rochester.edu

The GAGA transcription factor of Drosophila melanogaster is ubiquitous and plays multiple roles. Characterization of cDNA clones and detection by domain- specific antibodies has revealed that the 70-90 kDa major GAGA species are encoded by two open reading frames producing GAGA factor proteins of 519 amino acids (GAGA-519) and 581 amino acids (GAGA- 581), which share a common N-terminal region that is linked to two different glutamine-rich C-termini. Purified recombinant GAGA-519 and GAGA-581 proteins can form homomeric complexes that bind specifically to a single GAGA sequence in vitro. The two GAGA isoforms also function similarly in transient transactivation assays in tissue culture cells and in chromatin remodeling experiments in vitro . Only GAGA-519 protein accumulates during the first 6 h of embryogenesis. Thereafter, both GAGA proteins are present in nearly equal amounts throughout development; in larval salivary gland nuclei they colocalize completely to specific regions along the euchromatic arms of the polytene chromosomes. Coimmunoprecipitation of GAGA-519 and GAGA-581 from crude nuclear extracts and from mixtures of purified recombinant proteins, indicates direct interactions. We suggest that homomeric complexes of GAGA-519 may function during early embryogenesis; both homomeric and heteromeric complexes of GAGA-519 and GAGA-581 may function later.
Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
Nucleic Acids ResHome page
J. Bernues, D. Pineyro, and A. Kosoy
General, negative feedback mechanism for regulation of Trithorax-like gene expression in vivo: new roles for GAGA factor in flies
Nucleic Acids Res., December 18, 2007; 35(21): 7150 - 7159.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
M. Gabler, M. Volkmar, S. Weinlich, A. Herbst, P. Dobberthien, S. Sklarss, L. Fanti, S. Pimpinelli, H. Kress, G. Reuter, et al.
Trans-splicing of the mod(mdg4) Complex Locus Is Conserved Between the Distantly Related Species Drosophila melanogaster and D. virilis
Genetics, February 1, 2005; 169(2): 723 - 736.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
L. Melnikova, F. Juge, N. Gruzdeva, A. Mazur, G. Cavalli, and P. Georgiev
Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila
PNAS, October 12, 2004; 101(41): 14806 - 14811.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. Pagans, D. Pineyro, A. Kosoy, J. Bernues, and F. Azorin
Repression by TTK69 of GAGA-mediated Activation Occurs in the Absence of TTK69 Binding to DNA and Solely Requires the Contribution of the POZ/BTB Domain of TTK69
J. Biol. Chem., March 12, 2004; 279(11): 9725 - 9732.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
A. J. Greenberg, J. L. Yanowitz, and P. Schedl
The Drosophila GAGA Factor Is Required for Dosage Compensation in Males and for the Formation of the Male-Specific-Lethal Complex Chromatin Entry Site at 12DE
Genetics, January 1, 2004; 166(1): 279 - 289.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
T. Shimojima, M. Okada, T. Nakayama, H. Ueda, K. Okawa, A. Iwamatsu, H. Handa, and S. Hirose
Drosophila FACT contributes to Hox gene expression through physical and functional interactions with GAGA factor
Genes & Dev., July 1, 2003; 17(13): 1605 - 1616.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
C.-H. Wu, Y. Yamaguchi, L. R. Benjamin, M. Horvat-Gordon, J. Washinsky, E. Enerly, J. Larsson, A. Lambertsson, H. Handa, and D. Gilmour
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila
Genes & Dev., June 1, 2003; 17(11): 1402 - 1414.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
B. van Steensel, J. Delrow, and H. J. Bussemaker
Genomewide analysis of Drosophila GAGA factor target genes reveals context-dependent DNA binding
PNAS, March 4, 2003; 100(5): 2580 - 2585.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. Kosoy, S. Pagans, M. L. Espinas, F. Azorin, and J. Bernues
GAGA Factor Down-regulates Its Own Promoter
J. Biol. Chem., October 25, 2002; 277(44): 42280 - 42288.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
S. Pagans, M. Ortiz-Lombardia, M. L. Espinas, J. Bernues, and F. Azorin
The Drosophila transcription factor tramtrack (TTK) interacts with Trithorax-like (GAGA) and represses GAGA-mediated activation
Nucleic Acids Res., October 15, 2002; 30(20): 4406 - 4413.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
A. Schwendemann and M. Lehmann
Pipsqueak and GAGA factor act in concert as partners at homeotic and many other loci
PNAS, October 1, 2002; 99(20): 12883 - 12888.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
B. A. Leibovitch, Q. Lu, L. R. Benjamin, Y. Liu, D. S. Gilmour, and S. C. R. Elgin
GAGA Factor and the TFIID Complex Collaborate in Generating an Open Chromatin Structure at the Drosophila melanogaster hsp26 Promoter
Mol. Cell. Biol., September 1, 2002; 22(17): 6148 - 6157.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
D.-H. Huang, Y.-L. Chang, C.-C. Yang, I-C. Pan, and B. King
pipsqueak Encodes a Factor Essential for Sequence-Specific Targeting of a Polycomb Group Protein Complex
Mol. Cell. Biol., September 1, 2002; 22(17): 6261 - 6271.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. Volpi, C. Rabadan-Diehl, N. Cawley, and G. Aguilera
Transcriptional Regulation of the Pituitary Vasopressin V1b Receptor Involves a GAGA-binding Protein
J. Biol. Chem., July 26, 2002; 277(31): 27829 - 27838.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
A. J. Greenberg and P. Schedl
GAGA Factor Isoforms Have Distinct but Overlapping Functions In Vivo
Mol. Cell. Biol., December 15, 2001; 21(24): 8565 - 8574.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
J. W. Hodgson, B. Argiropoulos, and H. W. Brock
Site-Specific Recognition of a 70-Base-Pair Element Containing d(GA)n Repeats Mediates bithoraxoid Polycomb Group Response Element-Dependent Silencing
Mol. Cell. Biol., July 15, 2001; 21(14): 4528 - 4543.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. A. Pile and I. L. Cartwright
GAGA Factor-dependent Transcription and Establishment of DNase Hypersensitivity Are Independent and Unrelated Events in Vivo
J. Biol. Chem., January 14, 2000; 275(2): 1398 - 1404.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. L. Espinas, E. Jimenez-Garcia, A. Vaquero, S. Canudas, J. Bernues, and F. Azorin
The N-terminal POZ Domain of GAGA Mediates the Formation of Oligomers That Bind DNA with High Affinity and Specificity
J. Biol. Chem., June 4, 1999; 274(23): 16461 - 16469.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. Lehmann, T. Siegmund, K.-G. Lintermann, and G. Korge
The Pipsqueak Protein of Drosophila melanogaster Binds to GAGA Sequences through a Novel DNA-binding Domain
J. Biol. Chem., October 23, 1998; 273(43): 28504 - 28509.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
A. Vaquero, M. L. Espinas, F. Azorin, and J. Bernues
Functional Mapping of the GAGA Factor Assigns Its Transcriptional Activity to the C-terminal Glutamine-rich Domain
J. Biol. Chem., June 23, 2000; 275(26): 19461 - 19468.
[Abstract] [Full Text] [PDF]



Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.