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Nucleic Acids Research, Vol 25, Issue 9 1685-1693, Copyright © 1997 by Oxford University Press


ARTICLES

DNA binding and DNA bending by the MelR transcription activator protein from Escherichia coli

SJ Bourgerie, CM Michan, MS Thomas, SJ Busby and EI Hyde
School of Biochemistry, The University of Birmingham, PO Box 363, Birmingham B15 2TT, UK.

The Escherichia coli melR gene encodes MelR protein which is a member of the AraC/XylS family of bacterial transcription activators. The function of MelR was investigated by making a targeted deletion in the melR gene of the Escherichia coli chromosome. MelR is a transcription activator essential for melibiose- dependent expression of the melAB operon which is needed for bacterial growth with melibiose as a carbon source. To investigate the interactions of MelR at the melAB promoter, both full length MelR and a shortened derivative, MelR173, containing the C-terminal DNA-binding domain, were purified as fusions to glutathione- S -transferase. Circular permutation studies show that both full-length MelR and MelR173 induce an apparent bend upon binding to target sites at the melAB promoter. Bound full-length MelR, but not MelR173, can oligomerise to form larger complexes that are likely to be involved in transcription activation.
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