Nucleic Acids Research, Vol 26, Issue 9 2125-2131, Copyright © 1998 by Oxford University Press
SK Amundsen, AF Taylor and GR Smith
RecBCD enzyme acts in the major pathway of homologous recombination of
linear DNA in Escherichia coli. The enzyme unwinds DNA and is an ATP-
dependent double-strand and single-strand exonuclease and a single- strand
endonuclease; it acts at Chi recombination hotspots (5'-GCTGGTGG- 3') to
produce a recombinogenic single-stranded DNA 3'-end. We found that a small
RNA with a unique sequence of approximately 24 nt was tightly bound to
RecBCD enzyme and co-purified with it. When added to native enzyme this
RNA, but not four others, increased DNA unwinding and Chi nicking
activities of the enzyme. In seven similarly active enzyme preparations the
molar ratio of RNA molecules to RecBCD enzyme molecules ranged from 0.2 to
<0.008. These results suggest that, although this unique RNA is not an
essential enzyme subunit, it has a biological role in stimulating RecBCD
enzyme activity.
ARTICLES
A stimulatory RNA associated with RecBCD enzyme
Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue North, A1- 162, PO Box 19024, Seattle, WA 98109, USA.
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