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Nucleic Acids Research, Vol 27, Issue 1 196-197, Copyright © 1999 by Oxford University Press


ARTICLES

The RNA Modification Database: 1999 update

J Rozenski, PF Crain and JA McCloskey
Department of Medicinal Chemistry and Department of Biochemistry, University of Utah, 30 S. 2000 East,Salt Lake City, UT 84112-5820, USA.

The RNA Modification Database (http://medlib.med.utah.edu/RNAmods/) provides a comprehensive listing of naturally modified nucleosides in RNA. Each file includes: chemical structure; common name and symbol; type(s) of RNA in which found and corresponding phylogenetic distribution; Chemical s registry number and index name; and initial literature citations for structure characterization and chemical synthesis. New features include capability to search database files by name or substructural features, modifications in tmRNA, and links to related data and sites.
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Nucleic Acids ResHome page
J. Mengel-Jorgensen and F. Kirpekar
Detection of pseudouridine and other modifications in tRNA by cyanoethylation and MALDI mass spectrometry
Nucleic Acids Res., December 1, 2002; 30(23): e135 - e135.
[Abstract] [Full Text] [PDF]


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MicrobiologyHome page
T. K. Dineshkumar, S. Thanedar, C. Subbulakshmi, and U. Varshney
An unexpected absence of queuosine modification in the tRNAs of an Escherichia coli B strain
Microbiology, December 1, 2002; 148(12): 3779 - 3787.
[Abstract] [Full Text] [PDF]


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J. Bacteriol.Home page
J. Urbonavicius, J. M. B. Durand, and G. R. Bjork
Three Modifications in the D and T Arms of tRNA Influence Translation in Escherichia coli and Expression of Virulence Genes in Shigella flexneri
J. Bacteriol., October 1, 2002; 184(19): 5348 - 5357.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
F. Lecointe, O. Namy, I. Hatin, G. Simos, J.-P. Rousset, and H. Grosjean
Lack of Pseudouridine 38/39 in the Anticodon Arm of Yeast Cytoplasmic tRNA Decreases in Vivo Recoding Efficiency
J. Biol. Chem., August 16, 2002; 277(34): 30445 - 30453.
[Abstract] [Full Text] [PDF]


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Mol. Cell. Biol.Home page
J. Kufel, C. Allmang, L. Verdone, J. D. Beggs, and D. Tollervey
Lsm Proteins Are Required for Normal Processing of Pre-tRNAs and Their Efficient Association with La-Homologous Protein Lhp1p
Mol. Cell. Biol., July 15, 2002; 22(14): 5248 - 5256.
[Abstract] [Full Text] [PDF]


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Antimicrob. Agents Chemother.Home page
M. Liu and S. Douthwaite
Activity of the Ketolide Telithromycin Is Refractory to Erm Monomethylation of Bacterial rRNA
Antimicrob. Agents Chemother., June 1, 2002; 46(6): 1629 - 1633.
[Abstract] [Full Text] [PDF]


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J. Biol. Chem.Home page
S. Agarwalla, J. T. Kealey, D. V. Santi, and R. M. Stroud
Characterization of the 23 S Ribosomal RNA m5U1939 Methyltransferase from Escherichia coli
J. Biol. Chem., March 8, 2002; 277(11): 8835 - 8840.
[Abstract] [Full Text] [PDF]


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Nucleic Acids ResHome page
S. N. Mikhailov, J. Rozenski, E. V. Efimtseva, R. Busson, A. Van Aerschot, and P. Herdewijn
Chemical incorporation of 1-methyladenosine into oligonucleotides
Nucleic Acids Res., March 1, 2002; 30(5): 1124 - 1131.
[Abstract] [Full Text] [PDF]



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