Nucleic Acids Research, Vol 27, Issue 1 85-88, Copyright © 1999 by Oxford University Press
The FlyBase Drosophila genetics database and the public interfaces of the
Berkeley Drosophila Genome Project (BDGP) and European Drosophila Genome
Project (EDGP) are in the process of integrating. At present, the data of
these projects are available from independent, but hyperlinked, WWW sites
(FlyBase URL, http://flybase. bio.indiana.edu/; BDGP URL,
http://fruitfly.berkeley.edu/; EDGP URL, http://edgp.ebi.ac.uk/ ). Because
of the considerable overlap of data classes between the contributions of
the Drosophila genome projects and the Drosophila community, the new and
enlarged FlyBase consortium views the implementation of a single integrated
Drosophila genomics/genetics server as essential to the scientific
community. This integration will occur in a stepwise fashion over the next
1-2 years. In this report, the salient features of the current databases
and how to interrogate and navigate the extensive data sets are discussed.
ARTICLES
The FlyBase database of the Drosophila Genome Projects and community literature. The FlyBase Consortium
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T. G. O. Consortium Creating the Gene Ontology Resource: Design and Implementation Genome Res., August 1, 2001; 11(8): 1425 - 1433. [Abstract] [Full Text] [PDF]
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Y.-L. Chang, Y.-H. Peng, I-C. Pan, D.-S. Sun, B. King, and D.-H. Huang Essential role of Drosophila Hdac1 in homeotic gene silencing PNAS, August 1, 2001; (2001) 171325498. [Abstract] [Full Text] [PDF]
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H. D. Hoyle, F. R. Turner, L. Brunick, and E. C. Raff Tubulin Sorting during Dimerization In Vivo Mol. Biol. Cell, July 1, 2001; 12(7): 2185 - 2194. [Abstract] [Full Text] [PDF]
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D. R. LaJeunesse, B. M. McCartney, and R. G. Fehon A Systematic Screen for Dominant Second-Site Modifiers of Merlin/NF2 Phenotypes Reveals an Interaction With blistered/DSRF and scribbler Genetics, June 1, 2001; 158(2): 667 - 679. [Abstract] [Full Text] [PDF]
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V. Ledent and M. Vervoort The Basic Helix-Loop-Helix Protein Family: Comparative Genomics and Phylogenetic Analysis Genome Res., May 1, 2001; 11(5): 754 - 770. [Abstract] [Full Text]
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R. O. Stuart, K. T. Bush, and S. K. Nigam Changes in global gene expression patterns during development and maturation of the rat kidney PNAS, April 25, 2001; (2001) 91110798. [Abstract] [Full Text]
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H. Yue, P. S. Eastman, B. B. Wang, J. Minor, M. H. Doctolero, R. L. Nuttall, R. Stack, J. W. Becker, J. R. Montgomery, M. Vainer, et al. An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression Nucleic Acids Res., April 15, 2001; 29(8): e41 - e41. [Abstract] [Full Text] [PDF]
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J. Qian, B. Stenger, C. A. Wilson, J. Lin, R. Jansen, S. A. Teichmann, J. Park, W. G. Krebs, H. Yu, V. Alexandrov, et al. PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information Nucleic Acids Res., April 15, 2001; 29(8): 1750 - 1764. [Abstract] [Full Text] [PDF]
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 C. G. Zervas, S. L. Gregory, and N. H. Brown Drosophila Integrin-Linked Kinase Is Required at Sites of Integrin Adhesion to Link the Cytoskeleton to the Plasma Membrane J. Cell Biol., March 5, 2001; 152(5): 1007 - 1018. [Abstract] [Full Text] [PDF]
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A. Saiardi, E. Nagata, H. R. Luo, A. Sawa, X. Luo, A. M. Snowman, and S. H. Snyder Mammalian inositol polyphosphate multikinase synthesizes inositol 1,4,5-trisphosphate and an inositol pyrophosphate PNAS, February 8, 2001; (2001) 41614598. [Abstract] [Full Text]
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E. Kurant, D. Eytan, and A. Salzberg Mutational Analysis of the Drosophila homothorax Gene Genetics, February 1, 2001; 157(2): 689 - 698. [Abstract] [Full Text]
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M. A. Su, R. G. Wisotzkey, and S. J. Newfeld A Screen for Modifiers of decapentaplegic Mutant Phenotypes Identifies lilliputian, the Only Member of the Fragile-X/Burkitt's Lymphoma Family of Transcription Factors in Drosophila melanogaster Genetics, February 1, 2001; 157(2): 717 - 725. [Abstract] [Full Text]
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L. Dobens, E Martin-Blanco, A Martinez-Arias, F. Kafatos, and L. Raftery Drosophila puckered regulates Fos/Jun levels during follicle cell morphogenesis Development, January 5, 2001; 128(10): 1845 - 1856. [Abstract] [PDF]
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P. Elstob, V Brodu, and A. Gould spalt-dependent switching between two cell fates that are induced by the Drosophila EGF receptor Development, January 3, 2001; 128(5): 723 - 732. [Abstract] [PDF]
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T. Cline A lesson from flex: consider the Y chromosome when assessing Drosophila sex-specific lethals Development, January 3, 2001; 128(6): 1015 - 1018. [Abstract] [PDF]
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G. Stoesser, W. Baker, A. van den Broek, E. Camon, M. Garcia-Pastor, C. Kanz, T. Kulikova, V. Lombard, R. Lopez, H. Parkinson, et al. The EMBL nucleotide sequence database Nucleic Acids Res., January 1, 2001; 29(1): 17 - 21. [Abstract] [Full Text] [PDF]
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K. D. Pruitt and D. R. Maglott RefSeq and LocusLink: NCBI gene-centered resources Nucleic Acids Res., January 1, 2001; 29(1): 137 - 140. [Abstract] [Full Text] [PDF]
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K. A. Dunn, J. P. Bielawski, and Z. Yang Substitution Rates in Drosophila Nuclear Genes: Implications for Translational Selection Genetics, January 1, 2001; 157(1): 295 - 305. [Abstract] [Full Text]
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