Nucleic Acids Research, Vol 27, Issue 10 2063-2071, Copyright © 1999 by Oxford University Press
C Zwieb, I Wower and J Wower
Minimal secondary structures of the bacterial and plastid tmRNAs were
derived by comparative analyses of 50 aligned tmRNA sequences. The
structures include 12 helices and four pseudoknots and are refinements of
earlier versions, but include only those base pairs for which there is
comparative evidence. Described are the conserved and variable features of
the tmRNAs from a wide phylogenetic spectrum, the structural properties
specific to the bacterial subgroups and preliminary 3-dimensional models
from the pseudoknotted regions.
REVIEWS
Comparative sequence analysis of tmRNA
Department of Molecular Biology, The University of Texas Health Science Center at Tyler, 11937 US Highway 271, Tyler, TX 75708-3154, USA. zwieb@uthct.edu
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