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Nucleic Acids Research, 2000, Vol. 28, No. 1 104-107
© 2000 Oxford University Press

UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics

Jo Dicks, Mary Anderson1, Linda Cardle2, Sam Cartinhour3, Matthew Couchman, Guy Davenport, Jeremy Dickson4, Mike Gale, David Marshall2, Sean May1,*, Hamish McWilliam, Andrew O’Malia, Helen Ougham4, Martin Trick, Sean Walsh1 and Robbie Waugh2

John Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, UK, 1NASC, Division of Plant Science (UP), University of Nottingham, Nottingham NG7 2RD, UK, 2Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK, 3USDA-ARS and Department of Plant Breeding, Cornell University, Ithaca, NY 14853, USA and 4Institute of Grassland and Environmental Research, Plas Gogerddan, Aberystwyth, Ceredigion SY23 3EB, UK

The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we have published five databases from our central UK CropNet WWW site (http://synteny.nott.ac.uk/ ) with a further three to follow shortly. Our resource facilitates the identification and manipulation of agronomically important genes by laying a foundation for comparative analysis among crop plants and model species. In addition, we have developed a number of software tools that facilitate the visualisation and analysis of our data. Many of our tools are made freely available for use with both crop plant data and with data from other species.

* To whom correspondence should be addressed. Tel: +44 115 951 3237; Fax: +44 115 951 3297; Email: sean_may@nasc.nott.ac.uk


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