Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (91K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (40)
Right arrowRequest Permissions
Citing Articles
Right arrowScopus Links
Right arrowCiting Articles via CrossRef
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Szymanski, M.
Right arrow Articles by Erdmann, V. A.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Szymanski, M.
Right arrow Articles by Erdmann, V. A.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 2000, Vol. 28, No. 1 166-167
© 2000 Oxford University Press

5S ribosomal RNA database Y2K

Maciej Szymanski, Miroslawa Z. Barciszewska, Jan Barciszewski and Volker A. Erdmann1,*

Institute of Bioorganic Chemistry of the Polish Academy of Sciences, Noskowskiego 12, 61704 Poznan, Poland and 1Institut für Chemie, Freie Universität Berlin, Thielallee 63, 14195 Berlin, Germany

This paper presents the updated version (Y2K) of the database of ribosomal 5S ribonucleic acids (5S rRNA) and their genes (5S rDNA), http://rose.man/poznan. pl/5SData/index.html . This edition of the database contains 1985 primary structures of 5S rRNA and 5S rDNA. They include 60 archaebacterial, 470 eubacterial, 63 plastid, nine mitochondrial and 1383 eukaryotic sequences. The nucleotide sequences of the 5S rRNAs or 5S rDNAs are divided according to the taxonomic position of the source organisms.

* To whom correspondence should be addressed. Tel. +49 30 838 6402; Fax. +49 30 838 6403; Email: erdmann@chemie.fu-berlin.de


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Nucleic Acids ResHome page
A. O. Harmanci, G. Sharma, and D. H. Mathews
Stochastic sampling of the RNA structural alignment space
Nucleic Acids Res., July 1, 2009; 37(12): 4063 - 4075.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
A. O. Harmanci, G. Sharma, and D. H. Mathews
PARTS: Probabilistic Alignment for RNA joinT Secondary structure prediction
Nucleic Acids Res., April 1, 2008; 36(7): 2406 - 2417.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
J. Reeder and R. Giegerich
Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction
Bioinformatics, September 1, 2005; 21(17): 3516 - 3523.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
D. H. Mathews
Predicting a set of minimal free energy RNA secondary structures common to two sequences
Bioinformatics, May 15, 2005; 21(10): 2246 - 2253.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
D. H. MATHEWS
Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization
RNA, August 1, 2004; 10(8): 1178 - 1190.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
D. H. Mathews, M. D. Disney, J. L. Childs, S. J. Schroeder, M. Zuker, and D. H. Turner
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
PNAS, May 11, 2004; 101(19): 7287 - 7292.
[Abstract] [Full Text] [PDF]

Home page
 J BiochemHome page
M. Z. Barciszewska, E. Wyszko, R. Bald, V. A. Erdmann, and J. Barciszewski
5S rRNA Is a Leadzyme. A Molecular Basis for Lead Toxicity
J. Biochem., March 1, 2003; 133(3): 309 - 315.
[Abstract] [Full Text] [PDF]

Home page
 Genes Dev.Home page
A. Ishizuka, M. C. Siomi, and H. Siomi
A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins
Genes & Dev., October 1, 2002; 16(19): 2497 - 2508.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
J. Wuyts, Y. Van de Peer, and R. De Wachter
Distribution of substitution rates and location of insertion sites in the tertiary structure of ribosomal RNA
Nucleic Acids Res., December 15, 2001; 29(24): 5017 - 5028.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
N. S. Entelis, O. A. Kolesnikova, S. Dogan, R. P. Martin, and I. A. Tarassov
5 S rRNA and tRNA Import into Human Mitochondria. COMPARISON OF IN VITRO REQUIREMENTS
J. Biol. Chem., November 30, 2001; 276(49): 45642 - 45653.
[Abstract] [Full Text] [PDF]

Home page
 Cold Spring Harb Symp Quant BiolHome page
J. OFENGAND, A. MALHOTRA, J. REMME, N.S. GUTGSELL, M. DEL CAMPO, S. JEAN-CHARLES, L. PEIL, and Y. KAYA
Pseudouridines and Pseudouridine Synthases of the Ribosome
Cold Spring Harb Symp Quant Biol, January 1, 2001; 66(0): 147 - 160.
[Abstract] [PDF]

Home page
 Mol Biol EvolHome page
M. Szyma, M. Z. Barciszewska, V. A. Erdmann, and J. Barciszewski
An Analysis of G-U Base Pair Occurrence in Eukaryotic 5S rRNAs
Mol. Biol. Evol., August 1, 2000; 17(8): 1194 - 1198.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.