Nucleic Acids Research, 2000, Vol. 28, No. 17 3185-3196
© 2000 Oxford University Press
Survey and Summary |
SURVEY AND SUMMARY
Antizyme expression: a subversion of triplet decoding, which is remarkably conserved by evolution, is a sensor for an autoregulatory circuit
Department of Human Genetics, University of Utah, 15N 2030E, Room 7410, Salt Lake City, UT 84112-5330, USA
The efficiency of programmed ribosomal frameshifting in decoding antizyme mRNA is the sensor for an autoregulatory circuit that controls cellular polyamine levels in organisms ranging from the yeast Schizosaccharomyces pombe to Drosophila to mammals. Comparison of the frameshift sites and flanking stimulatory signals in many organisms now permits a reconstruction of the likely evolutionary path of the remarkably conserved mRNA sequences involved in the frameshifting.
* To whom correspondence should be addressed. Tel: +1 801 585 3434; Fax: +1 801 585 3910; Email: john.atkins@genetics.utah.edu
![]()
CiteULike
Connotea
Del.icio.us What's this?
This article has been cited by other articles:
![]() |
J.-i. Suzuki, Y. Murakami, K. Samejima, K. K. M. Ohtani, and T. Oka Antizyme is necessary for conversion of pancreatic tumor cells into glucagon-producing differentiated cells Endocr. Relat. Cancer, June 1, 2009; 16(2): 649 - 659. [Abstract] [Full Text] [PDF] |
||||
![]() |
I. P. Ivanov and J. F. Atkins Ribosomal frameshifting in decoding antizyme mRNAs from yeast and protists to humans: close to 300 cases reveal remarkable diversity despite underlying conservation Nucleic Acids Res., March 19, 2007; 35(6): 1842 - 1858. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. M. Petros, G. F. Graminski, S. Robinson, M. R. Burns, N. Kisiel, R. F. Gesteland, J. F. Atkins, D. L. Kramer, M. T. Howard, and R. S. Weeks Polyamine Analogs with Xylene Rings Induce Antizyme Frameshifting, Reduce ODC Activity, and Deplete Cellular Polyamines J. Biochem., November 1, 2006; 140(5): 657 - 666. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. E. Pegg Regulation of Ornithine Decarboxylase J. Biol. Chem., May 26, 2006; 281(21): 14529 - 14532. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. M. Wills, B. Moore, A. Hammer, R. F. Gesteland, and J. F. Atkins A Functional -1 Ribosomal Frameshift Signal in the Human Paraneoplastic Ma3 Gene J. Biol. Chem., March 17, 2006; 281(11): 7082 - 7088. [Abstract] [Full Text] [PDF] |
||||
![]() |
I. P. IVANOV, R. F. GESTELAND, and J. F. ATKINS Evolutionary specialization of recoding: Frameshifting in the expression of S. cerevisiae antizyme mRNA is via an atypical antizyme shift site but is still +1 RNA, March 1, 2006; 12(3): 332 - 337. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. Hanfrey, K. A. Elliott, M. Franceschetti, M. J. Mayer, C. Illingworth, and A. J. Michael A Dual Upstream Open Reading Frame-based Autoregulatory Circuit Controlling Polyamine-responsive Translation J. Biol. Chem., November 25, 2005; 280(47): 39229 - 39237. [Abstract] [Full Text] [PDF] |
||||
![]() |
O. L. Gurvich, P. V. Baranov, R. F. Gesteland, and J. F. Atkins Expression Levels Influence Ribosomal Frameshifting at the Tandem Rare Arginine Codons AGG_AGG and AGA_AGA in Escherichia coli J. Bacteriol., June 15, 2005; 187(12): 4023 - 4032. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. G. Schipper, V. M.J.I. Cuijpers, L. H.J.M. de Groot, M. Thio, and A. A.J. Verhofstad Intracellular Localization of Ornithine Decarboxylase and Its Regulatory Protein, Antizyme-1 J. Histochem. Cytochem., October 1, 2004; 52(10): 1259 - 1266. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Moon, Y. Byun, H.-J. Kim, S. Jeong, and K. Han Predicting genes expressed via -1 and +1 frameshifts Nucleic Acids Res., September 15, 2004; 32(16): 4884 - 4892. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. V. BARANOV, R. F. GESTELAND, and J. F. ATKINS P-site tRNA is a crucial initiator of ribosomal frameshifting RNA, February 1, 2004; 10(2): 221 - 230. [Abstract] [Full Text] [PDF] |
||||
![]() |
X. Zhang, Y. Kluger, Y. Nakayama, R. Poddar, C. Whitney, A. DeTora, S. M. Weissman, and P. E. Newburger Gene expression in mature neutrophils: early responses to inflammatory stimuli J. Leukoc. Biol., February 1, 2004; 75(2): 358 - 372. [Abstract] [Full Text] [PDF] |
||||
![]() |
X. GAO, E. R. HAVECKER, P. V. BARANOV, J. F. ATKINS, and D. F. VOYTAS Translational recoding signals between gag and pol in diverse LTR retrotransposons RNA, December 1, 2003; 9(12): 1422 - 1430. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Murai, Y. Murakami, and S. Matsufuji Identification of Nuclear Export Signals in Antizyme-1 J. Biol. Chem., November 7, 2003; 278(45): 44791 - 44798. [Abstract] [Full Text] [PDF] |
||||
![]() |
Z. N. Karamysheva, A. L. Karamyshev, K. Ito, T. Yokogawa, K. Nishikawa, Y. Nakamura, and S. Matsufuji Antizyme frameshifting as a functional probe of eukaryotic translational termination Nucleic Acids Res., October 15, 2003; 31(20): 5949 - 5956. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. V. Baranov, O. L. Gurvich, A. W. Hammer, R. F. Gesteland, and J. F. Atkins RECODE 2003 Nucleic Acids Res., January 1, 2003; 31(1): 87 - 89. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Schenkel, S. Hanke, C. De Lorenzo, R. Schmitt, and B. M. Mechler P Elements Inserted in the Vicinity of or Within the Drosophila snRNP SmD3 Gene Nested in the First Intron of the Ornithine Decarboxylase Antizyme Gene Affect Only the Expression of SmD3 Genetics, June 1, 2002; 161(2): 763 - 772. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. I. Quinones, A. F. List, and E. W. Gerner Selective Exclusion by the Polyamine Transporter as a Mechanism for Differential Radioprotection of Amifostine Derivatives Clin. Cancer Res., May 1, 2002; 8(5): 1295 - 1300. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Kaplun, D. M. Chipman, and Z.'e. Barak Isoleucine starvation caused by sulfometuron methyl in Salmonella typhimurium measured by translational frameshifting Microbiology, March 1, 2002; 148(3): 713 - 717. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. J. Feith, L. M. Shantz, and A. E. Pegg Targeted Antizyme Expression in the Skin of Transgenic Mice Reduces Tumor Promoter Induction of Ornithine Decarboxylase and Decreases Sensitivity to Chemical Carcinogenesis Cancer Res., August 1, 2001; 61(16): 6073 - 6081. [Abstract] [Full Text] [PDF] |
||||
![]() |
J.F. ATKINS, P.V. BARANOV, O. FAYET, A.J. HERR, M.T. HOWARD, I.P. IVANOV, S. MATSUFUJI, W.A. MILLER, B. MOORE, M.F. PRERE, et al. Overriding Standard Decoding: Implications of Recoding for Ribosome Function and Enrichment of Gene Expression Cold Spring Harb Symp Quant Biol, January 1, 2001; 66(0): 217 - 232. [Abstract] [PDF] |
||||
![]() |
M. K. Chattopadhyay, Y. Murakami, and S. Matsufuji Antizyme Regulates the Degradation of Ornithine Decarboxylase in Fission Yeast Schizosaccharomyces pombe. STUDY IN THE spe2 KNOCKOUT STRAINS J. Biol. Chem., June 8, 2001; 276(24): 21235 - 21241. [Abstract] [Full Text] [PDF] |
||||
![]() |
C. M. James, T. K. Ferguson, J. F. Leykam, and J. A. Krzycki The Amber Codon in the Gene Encoding the Monomethylamine Methyltransferase Isolated from Methanosarcina barkeri Is Translated as a Sense Codon J. Biol. Chem., August 31, 2001; 276(36): 34252 - 34258. [Abstract] [Full Text] [PDF] |
||||












