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Nucleic Acids Research, 2000, Vol. 28, No. 22 e96
© 2000 Oxford University Press

A simple and reliable 5'-RACE approach

Guido Schramm, Iris Bruchhaus1 and Thomas Roeder*

Universität Hamburg Zoologisches Institut, Martin-Luther-King-Platz 3, D-20146 Hamburg, Germany and 1Bernhard Nocht Institute for Tropical Medicine, Bernhard-Nocht-Straße 74, D-20359 Hamburg, Germany

A novel approach for the amplification of cDNA ends is described. It requires only minimal amounts of material, a simple cDNA synthesis reaction and a single PCR reaction to amplify the desired 5'- or 3'-ends of a certain cDNA of interest. It combines the so called CapFinder approach with solid phase cDNA synthesis, thus almost eliminating background problems usually associated with 5'-RACE protocols. This approach could be used to generate complete 5'-ends of numerous cDNAs using only one cDNA synthesis reaction. In combination with LA PCR, several kilobases of unknown 5'-ends could be amplified. It is easy to perform, quick, inexpensive and reliable, which should enable it to replace most currently used 5'-RACE protocols.

* To whom correspondence should be addressed. Tel: +49 40 42838 3941; Fax: +49 40 42838 3937; Email: roeder@zoologie.uni-hamburg.de


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