Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (650K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (57)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Bell, C. J.
Right arrow Articles by May, G. D.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Bell, C. J.
Right arrow Articles by May, G. D.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 2001, Vol. 29, No. 1 114-117
© 2001 Oxford University Press

The Medicago Genome Initiative: a model legume database

Callum J. Bell, Richard A. Dixon1, Andrew D. Farmer, Raul Flores, Jeff Inman, Robert A. Gonzales1, Maria J. Harrison1, Nancy L. Paiva1, Angela D. Scott1, Jennifer W. Weller2 and Gregory D. May1,*

The National Center for Genome Resources, 2935 Rodeo Park Drive East, Santa Fe, NM 87505, USA, 1Plant Biology Division, The Samuel Roberts Noble Foundation, 2510 Sam Noble Parkway, Ardmore, OK 73402, USA and 2Virginia Bioinformatics Institute, 1750 Kraft Drive Suite 1400, Virginia Tech, Blacksburg, VA 24061, USA

The Medicago Genome Initiative (MGI) is a database of EST sequences of the model legume Medicago truncatula. The database is available to the public and has resulted from a collaborative research effort between the Samuel Roberts Noble Foundation and the National Center for Genome Resources to investigate the genome of M.truncatula. MGI is part of the greater integrated Medicago functional genomics program at the Noble Foundation (http://www.noble.org ), which is taking a global approach in studying the genetic and biochemical events associated with the growth, development and environmental interactions of this model legume. Our approach will include: large-scale EST sequencing, gene expression profiling, the generation of M.truncatula activation-tagged and promoter trap insertion mutants, high-throughput metabolic profiling, and proteome studies. These multidisciplinary information pools will be interfaced with one another to provide scientists with an integrated, holistic set of tools to address fundamental questions pertaining to legume biology. The public interface to the MGI database can be accessed at http://www.ncgr.org/research/mgi.

* To whom correspondence should be addressed. Tel. +1 580 221 7391; Fax: +1 580 221 7380; Email: gdmay{at}noble.org


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
Plant Physiol.Home page
J. C. Pennycooke, H. Cheng, and E. J. Stockinger
Comparative Genomic Sequence and Expression Analyses of Medicago truncatula and Alfalfa Subspecies falcata COLD-ACCLIMATION-SPECIFIC Genes
Plant Physiology, March 1, 2008; 146(3): 1242 - 1254.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
L. de Lorenzo, F. Merchan, S. Blanchet, M. Megias, F. Frugier, M. Crespi, and C. Sousa
Differential Expression of the TFIIIA Regulatory Pathway in Response to Salt Stress between Medicago truncatula Genotypes
Plant Physiology, December 1, 2007; 145(4): 1521 - 1532.
[Abstract] [Full Text] [PDF]


Home page
BioinformaticsHome page
E. Urbanczyk-Wochniak and L. W. Sumner
MedicCyc: a biochemical pathway database for Medicago truncatula
Bioinformatics, June 1, 2007; 23(11): 1418 - 1423.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
K. Hanada, X. Zhang, J. O. Borevitz, W.-H. Li, and S.-H. Shiu
A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection
Genome Res., May 1, 2007; 17(5): 632 - 640.
[Abstract] [Full Text] [PDF]


Home page
Crop Sci.Home page
R. L. Phillips
Genetic Tools from Nature and the Nature of Genetic Tools
Crop Sci., September 8, 2006; 46(5): 2245 - 2252.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
S. B. Cannon, J. A. Crow, M. L. Heuer, X. Wang, E. K.S. Cannon, C. Dwan, A.-F. Lamblin, J. Vasdewani, J. Mudge, A. Cook, et al.
Databases and Information Integration for the Medicago truncatula Genome and Transcriptome
Plant Physiology, May 1, 2005; 138(1): 38 - 46.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
M. A. Graham, K. A.T. Silverstein, S. B. Cannon, and K. A. VandenBosch
Computational Identification and Characterization of Novel Genes from Legumes
Plant Physiology, July 1, 2004; 135(3): 1179 - 1197.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
S.-J. Yang, S. A. Carter, A. B. Cole, N.-H. Cheng, and R. S. Nelson
A natural variant of a host RNA-dependent RNA polymerase is associated with increased susceptibility to viruses by Nicotiana benthamiana
PNAS, April 20, 2004; 101(16): 6297 - 6302.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
D.-Y. Xie, L. A. Jackson, J. D. Cooper, D. Ferreira, and N. L. Paiva
Molecular and Biochemical Analysis of Two cDNA Clones Encoding Dihydroflavonol-4-Reductase from Medicago truncatula
Plant Physiology, March 1, 2004; 134(3): 979 - 994.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
K. Gallardo, C. Le Signor, J. Vandekerckhove, R. D. Thompson, and J. Burstin
Proteomics of Medicago truncatula Seed Development Establishes the Time Frame of Diverse Metabolic Processes Related to Reserve Accumulation
Plant Physiology, October 1, 2003; 133(2): 664 - 682.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
P. M. Melo, L. M. Lima, I. M. Santos, H. G. Carvalho, and J. V. Cullimore
Expression of the Plastid-Located Glutamine Synthetase of Medicago truncatula. Accumulation of the Precursor in Root Nodules Reveals an in Vivo Control at the Level of Protein Import into Plastids
Plant Physiology, May 1, 2003; 132(1): 390 - 399.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
K. A. VandenBosch and G. Stacey
Summaries of Legume Genomics Projects from around the Globe. Community Resources for Crops and Models
Plant Physiology, March 1, 2003; 131(3): 840 - 865.
[Full Text] [PDF]


Home page
Plant Physiol.Home page
R. A. Dixon and L. W. Sumner
Legume Natural Products: Understanding and Manipulating Complex Pathways for Human and Animal Health
Plant Physiology, March 1, 2003; 131(3): 878 - 885.
[Full Text] [PDF]


Home page
Plant Physiol.Home page
M.-T. Navarro-Gochicoa, S. Camut, A. Niebel, and J. V. Cullimore
Expression of the Apyrase-Like APY1 Genes in Roots of Medicago truncatula Is Induced Rapidly and Transiently by Stress and Not by Sinorhizobium meliloti or Nod Factors
Plant Physiology, March 1, 2003; 131(3): 1124 - 1136.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
E.-P. Journet, D. van Tuinen, J. Gouzy, H. Crespeau, V. Carreau, M.-J. Farmer, A. Niebel, T. Schiex, O. Jaillon, O. Chatagnier, et al.
Exploring root symbiotic programs in the model legume Medicago truncatula using EST analysis
Nucleic Acids Res., December 15, 2002; 30(24): 5579 - 5592.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
M. J. Harrison, G. R. Dewbre, and J. Liu
A Phosphate Transporter from Medicago truncatula Involved in the Acquisition of Phosphate Released by Arbuscular Mycorrhizal Fungi
PLANT CELL, October 1, 2002; 14(10): 2413 - 2429.
[Abstract] [Full Text] [PDF]


Home page
GlycobiologyHome page
W. D'Haeze and M. Holsters
Nod factor structures, responses, and perception during initiation of nodule development
Glycobiology, June 1, 2002; 12(6): 79R - 105R.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
J. Frugoli and J. Harris
Medicago truncatula on the Move!
PLANT CELL, March 1, 2001; 13(3): 458 - 463.
[Full Text]



Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.