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Nucleic Acids Research, 2002, Vol. 30, No. 1 183-185
© 2002 Oxford University Press

The European database on small subunit ribosomal RNA

Jan Wuyts, Yves Van de Peer1, Tina Winkelmans and Rupert De Wachter*

Departement Biochemie, Universiteit Antwerpen (UIA), Universiteitsplein 1, B-2610 Antwerpen, Belgium and 1Departement Plantengenetica, Vlaams Interuniversitair Instituut voor Biotechnologie (VIB), Universiteit Gent, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium

The European database on SSU rRNA can be consulted via the World WideWeb at http://rrna.uia.ac.be/ssu/ and compiles all complete or nearly complete small subunit ribosomal RNA sequences. Sequences are provided in aligned format. The alignment takes into account the secondary structure information derived by comparative sequence analysis of thousands of sequences. Additional information such as literature references, taxonomy, secondary structure models and nucleotide variability maps, is also available.

* To whom correspondence should be addressed. Tel: +32 3 8202319; Fax: +32 3 8202248; Email: dwachter{at}uia.ua.ac.be


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