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Nucleic Acids Research, 2002, Vol. 30, No. 18 3927-3935
© 2002 Oxford University Press

Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments

Hideto Takami*, Yoshihiro Takaki and Ikuo Uchiyama1

Japan Marine Science and Technology Center, Microbial Genome Research Group, 2–15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan and 1 Research Center for Computational Science, Okazaki National Research Institute, Nishigonaka 38, Myodaiji, Okazaki, Aichi 444-8585, Japan

*To whom correspondence should be addressed at present address: (until the end of January 2003) 8570 Biological Grade, 4405 Hubbs Hall, Marine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093-0202, USA; (after February 2003) Japan Marine Science and Technology Center. Tel: +1 858 534 5283; Fax: +1 858 534 7313; Email: htakami{at}ucsd.edu (UCSD), Tel: +81 468 67 9643; Fax: +81 468 67 9645; Email: takamih{at}jamstec.go.jp (JAMSTEC)

Oceanobacillus iheyensis HTE831 is an alkaliphilic and extremely halotolerant Bacillus-related species isolated from deep-sea sediment. We present here the complete genome sequence of HTE831 along with analyses of genes required for adaptation to highly alkaline and saline environments. The genome consists of 3.6 Mb, encoding many proteins potentially associated with roles in regulation of intracellular osmotic pressure and pH homeostasis. The candidate genes involved in alkaliphily were determined based on comparative analysis with three Bacillus species and two other Gram-positive species. Comparison with the genomes of other major Gram-positive bacterial species suggests that the backbone of the genus Bacillus is composed of approximately 350 genes. This second genome sequence of an alkaliphilic Bacillus-related species will be useful in understanding life in highly alkaline environments and microbial diversity within the ubiquitous bacilli.


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