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Nucleic Acids Research, 2003, Vol. 31, No. 13 3771-3774
© 2003 Oxford University Press

SIRW: a web server for the Simple Indexing and Retrieval System that combines sequence motif searches with keyword searches

Chenna Ramu*

European Molecular Biology Laboratory, Postfach 10.2209, 69012 Heidelberg, Germany

*Tel: +49 6221387530; Fax: +49 6221387517; Email: chenna{at}embl.de

SIRW (http://sirw.embl.de/) is a World Wide Web interface to the Simple Indexing and Retrieval System (SIR) that is capable of parsing and indexing various flat file databases. In addition it provides a framework for doing sequence analysis (e.g. motif pattern searches) for selected biological sequences through keyword search. SIRW is an ideal tool for the bioinformatics community for searching as well as analyzing biological sequences of interest.


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