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Nucleic Acids Research, 2003, Vol. 31, No. 9 2333-2343
© 2003 Oxford University Press

Dependence of pre-mRNA introns on PRP17, a non-essential splicing factor: implications for efficient progression through cell cycle transitions

Geetanjali Chawla, Aparna K. Sapra, Uttam Surana1 and Usha Vijayraghavan

Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India and 1 Institute of Molecular and Cell Biology, 30 Medical Drive, Singapore 117609, Singapore

*To whom correspondence should be addressed. Tel: +11 91 80 3600168; Fax: +11 91 80 3602697; Email: uvr{at}mcbl.iisc.ernet.in

Saccharomyces cerevisiae PRP17 (CDC40) encodes a second-step pre-mRNA splicing factor with a role in cell division. The functions of Prp17 in specific cell cycle transitions were examined using temperature-sensitive alleles in arrest/release experiments. We find that G1/S and G2/M transitions depend on Prp17. G1-synchronized prp17::LEU2 cells arrest at non-permissive temperatures as unbudded haploid cells with low levels of CLN1, CLB5 and RNR1 transcripts. This indicates a Prp17 execution point at or prior to Start. Reduced levels of {alpha}-tubulin protein, a mitotic spindle component, underlie the benomyl sensitivity of prp17 mutants and possibly their G2/M arrest. Splicing of TUB1 and TUB3 transcripts, which encode {alpha}-tubulin, was analyzed in prp17 and other second-step factor mutants. TUB1 splicing is inefficient in prp17, prp16 and prp22, and marginally affected in prp18, slu7-1 and psf1-1. TUB3 splicing is similarly affected. In vitro splicing with TUB3 pre-mRNA demonstrates a compromised second step in prp17::LEU2 extracts, implicating a direct role for Prp17 in its efficient splicing. Genomic replacement of an intronless TUB1 gene relieves the benomyl sensitivity of prp17 mutants; however, they remain temperature sensitive, implying multiple limiting factors for mitosis. The data suggest that integration of splicing with the cell cycle is important for G1/S and G2/M transitions.


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